RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ERGIC2Q96RQ1 377 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 FAM184BQ9ULE4 1060 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 SNX12Q9UMY4 172 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 PCDHA8Q9Y5H6 950 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 MAST2Q6P0Q8 1798 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 GOLGA6BA6NDN3 693 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 WNT10BO00744 389 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 CYP2D6P10635 497 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 PRPHP41219 470 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 PPP4CP60510 307 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 SBK1Q52WX2 424 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 ANKRD40Q6AI12 368 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
DDB1-224ENST00000545894 DAGLBQ8NCG7 672 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 TRIM58Q8NG06 486 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 FAM76AQ8TAV0 307 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 AENQ8WTP8 325 aaKnown RBP12.74□□□□□ -0.37
DDB1-224ENST00000545894 RUBCNQ92622 972 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 CCDC42Q96M95 316 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 NOC4LQ9BVI4 516 aaKnown RBP12.74□□□□□ -0.37
DDB1-224ENST00000545894 ADARB2Q9NS39 739 aaKnown RBP12.74□□□□□ -0.37
DDB1-224ENST00000545894 JRKLQ9Y4A0 524 aa12.74□□□□□ -0.37
DDB1-224ENST00000545894 WDR90Q96KV7 1748 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 SHOX2O60902 331 aaPredicted RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 TACC1O75410 805 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 EPHX2P34913 555 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 RHBDL3P58872 404 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 ITIH3Q06033 890 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 PDE4DQ08499 809 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 INF2Q27J81 1249 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 DNAJC21Q5F1R6 531 aaKnown RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 MIIPQ5JXC2 388 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 SH3RF3Q8TEJ3 882 aaPredicted RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 LRRC15Q8TF66 581 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 TAF1DQ9H5J8 278 aaPredicted RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 TDRD3Q9H7E2 651 aaKnown RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 BAG3O95817 575 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 NOP2P46087 812 aaKnown RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 GNAQP50148 359 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 CCDC96Q2M329 555 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 CABP7Q86V35 215 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 CREG2Q8IUH2 290 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 EEF2KMTQ96G04 330 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 AK8Q96MA6 479 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 NMRK2Q9NPI5 230 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 TCP11L1Q9NUJ3 509 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 LRWD1Q9UFC0 647 aa12.73□□□□□ -0.37
DDB1-224ENST00000545894 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
DDB1-224ENST00000545894 IQCA1LA6NCM1 817 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 ZNF263O14978 683 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 PRLRP16471 622 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 PLCG1P19174 1290 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 HNRNPH3P31942 346 aaKnown RBP12.72□□□□□ -0.37
DDB1-224ENST00000545894 GRM4Q14833 912 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
DDB1-224ENST00000545894 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 C7orf25Q9BPX7 421 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
DDB1-224ENST00000545894 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 FLT1P17948 1338 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 CLRN2A0PK11 232 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 ASIC1P78348 528 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 STK4Q13043 487 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 SND1Q7KZF4 910 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDB1-224ENST00000545894 PLAGL2Q9UPG8 496 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
DDB1-224ENST00000545894 BAZ2BQ9UIF8 2168 aaKnown RBP12.71□□□□□ -0.37
DDB1-224ENST00000545894 CACNB3P54284 484 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 TFAP4Q01664 338 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 USP50Q70EL3 339 aaPredicted RBP12.71□□□□□ -0.37
DDB1-224ENST00000545894 KRT26Q7Z3Y9 468 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 HEATR3Q7Z4Q2 680 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 EFCAB13Q8IY85 973 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 SMCR8Q8TEV9 937 aaPredicted RBP12.71□□□□□ -0.37
DDB1-224ENST00000545894 ANKS1AQ92625 1134 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 FAM107BQ9H098 131 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
DDB1-224ENST00000545894 CAPN6Q9Y6Q1 641 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 LAMB1P07942 1786 aa12.71□□□□□ -0.37
DDB1-224ENST00000545894 STXBP3O00186 592 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.38
DDB1-224ENST00000545894 OR52Z1P0C646 297 aa12.71□□□□□ -0.38
DDB1-224ENST00000545894 TCP1P17987 556 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms