RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 RRP36Q96EU6 259 aaKnown RBP16.69■□□□□ 0.26
CHFR-223ENST00000544268 CEP89Q96ST8 783 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
CHFR-223ENST00000544268 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 SH3GLB2Q9NR46 395 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 BIN2Q9UBW5 565 aaPredicted RBP16.69■□□□□ 0.26
CHFR-223ENST00000544268 PUF60Q9UHX1 559 aaKnown RBP16.69■□□□□ 0.26
CHFR-223ENST00000544268 HACL1Q9UJ83 578 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 TBC1D12O60347 775 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 HDXQ7Z353 690 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
CHFR-223ENST00000544268 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
CHFR-223ENST00000544268 GOLGA6L9A6NEM1 432 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 H7C1D1 291 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
CHFR-223ENST00000544268 FCER1AP12319 257 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 PLCG1P19174 1290 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 ERCC3P19447 782 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 SLC16A2P36021 539 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 UBA7P41226 1012 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 TECP42680 631 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 UBXN1Q04323 297 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 TNFAIP1Q13829 316 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 ARL6IP4Q66PJ3 421 aaKnown RBP16.68■□□□□ 0.26
CHFR-223ENST00000544268 GPC2Q8N158 579 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 SLF1Q9BQI6 1058 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 ABHD10Q9NUJ1 306 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
CHFR-223ENST00000544268 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 SMCO2A6NFE2 343 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 FILIP1LQ4L180 1135 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 ZNF569Q5MCW4 686 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 SLFN13Q68D06 897 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 ADSSL1Q8N142 457 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 GPRC5DQ9NZD1 345 aa16.68■□□□□ 0.26
CHFR-223ENST00000544268 SEC63Q9UGP8 760 aaKnown RBP16.68■□□□□ 0.26
CHFR-223ENST00000544268 SLC1A4P43007 532 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
CHFR-223ENST00000544268 POTEDQ86YR6 584 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 COA7Q96BR5 231 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 ZBTB21Q9ULJ3 1066 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 F5H6K3 240 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 CLSTN1O94985 981 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 MAP3K10Q02779 954 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 KLRC3Q07444 240 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 BEND6Q5SZJ8 279 aaPredicted RBP16.67■□□□□ 0.26
CHFR-223ENST00000544268 CTAGE1Q96RT6 745 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 CXorf56Q9H5V9 222 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 RNF181Q9P0P0 153 aa16.67■□□□□ 0.26
CHFR-223ENST00000544268 TTC26A0AVF1 554 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 LRRC10BA6NIK2 292 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 KRT9P35527 623 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 EPS15P42566 896 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 ECE1P42892 770 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 STK4Q13043 487 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 LRRC31Q6UY01 552 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 NDUFB10O96000 172 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 CAP2P40123 477 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 MCM6Q14566 821 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 SLC35F6Q8N357 371 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 CCDC148Q8NFR7 591 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 ACER1Q8TDN7 264 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 TBCKQ8TEA7 893 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 DCAF4Q8WV16 495 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 DONSONQ9NYP3 566 aa16.66■□□□□ 0.26
CHFR-223ENST00000544268 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
CHFR-223ENST00000544268 A0A087WUV0 522 aaPredicted RBP16.65■□□□□ 0.26
CHFR-223ENST00000544268 B4DLN1 442 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 EDIL3O43854 480 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 DDNO94850 711 aaPredicted RBP16.65■□□□□ 0.26
CHFR-223ENST00000544268 SEMA3FQ13275 785 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 MMTAG2Q9BU76 263 aaKnown RBP16.65■□□□□ 0.26
CHFR-223ENST00000544268 ZMYND12Q9H0C1 365 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 KBTBD4Q9NVX7 518 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 ARHGAP25P42331 645 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 ANGEL2Q5VTE6 544 aaKnown RBP16.65■□□□□ 0.26
CHFR-223ENST00000544268 CABP7Q86V35 215 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 TRIM47Q96LD4 638 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 DUSP9Q99956 384 aaKnown RBP16.65■□□□□ 0.26
CHFR-223ENST00000544268 FAN1Q9Y2M0 1017 aa16.65■□□□□ 0.26
CHFR-223ENST00000544268 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 SLC37A4O43826 429 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 TXKP42681 527 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 TADA2BQ86TJ2 420 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 CNGA4Q8IV77 575 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 AGPAT5Q9NUQ2 364 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 RAB21Q9UL25 225 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 PPFIA4O75335 1185 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 ERLIN1O75477 346 aa16.64■□□□□ 0.25
CHFR-223ENST00000544268 HIRAP54198 1017 aaPredicted RBP16.64■□□□□ 0.25
CHFR-223ENST00000544268 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms