RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PDXDC2PQ6P474 469 aa9.71□□□□□ -0.85
VPS13D-212ENST00000543766 MRPL46Q9H2W6 279 aaKnown RBP9.71□□□□□ -0.85
VPS13D-212ENST00000543766 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.85
VPS13D-212ENST00000543766 TMED5Q9Y3A6 229 aa9.71□□□□□ -0.85
VPS13D-212ENST00000543766 SPECC1L-ADORA2AF8WAN1 911 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 MTSS1O43312 755 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 SLC3A2P08195 630 aaKnown RBP9.71□□□□□ -0.86
VPS13D-212ENST00000543766 DR1Q01658 176 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 IQCEQ6IPM2 695 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 SIRT2Q8IXJ6 389 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 UBE2OQ9C0C9 1292 aaKnown RBP9.71□□□□□ -0.86
VPS13D-212ENST00000543766 OSBPL2Q9H1P3 480 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 BATF3Q9NR55 127 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 CEP72Q9P209 647 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 CHMP2BQ9UQN3 213 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 H7C1W4 665 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 FGAP02671 866 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 FESP07332 822 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 NCAM1P13591 858 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 VPS41P49754 854 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 GBE1Q04446 702 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 PABPC4Q13310 644 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS13D-212ENST00000543766 ODF2Q5BJF6 829 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 SLC2A7Q6PXP3 512 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 DDX42Q86XP3 938 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS13D-212ENST00000543766 SYTL1Q8IYJ3 562 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 OR8K1Q8NGG5 319 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 DEPTORQ8TB45 409 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 BCL7CQ8WUZ0 217 aaPredicted RBP9.71□□□□□ -0.86
VPS13D-212ENST00000543766 EDEM3Q9BZQ6 932 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 EMC3Q9P0I2 261 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 DACH1Q9UI36 760 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 ADGRF5Q8IZF2 1346 aa9.71□□□□□ -0.86
VPS13D-212ENST00000543766 ST18O60284 1047 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 RPS6KA5O75582 802 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 SURF6O75683 361 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 TRPA1O75762 1119 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 UPP2O95045 317 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 TOP1P11387 765 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 CASTP20810 708 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 ATP5OP48047 213 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 SERPINB4P48594 390 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 TRIM14Q14142 442 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 BTNL9Q6UXG8 535 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 SSH1Q8WYL5 1049 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 ORC4O43929 436 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 USO1O60763 962 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 SEMA3AQ14563 771 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 CREB3L3Q68CJ9 461 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 EHBP1Q8NDI1 1231 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 FRS2Q8WU20 508 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 JAKMIP1Q96N16 626 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 ADNPQ9H2P0 1102 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 PARVGQ9HBI0 331 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 TYW1Q9NV66 732 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 QPCTLQ9NXS2 382 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 BUB1BO60566 1050 aaPredicted RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 C6orf222P0C671 652 aaPredicted RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 GZMAP12544 262 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 DSTNP60981 165 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 LRMPQ12912 555 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 PKN2Q16513 984 aaKnown RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 BRDTQ58F21 947 aaPredicted RBP9.7□□□□□ -0.86
VPS13D-212ENST00000543766 TEKT4Q8WW24 435 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 TMX3Q96JJ7 454 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 SNX25Q9H3E2 840 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 ANO10Q9NW15 660 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 STRIP2Q9ULQ0 834 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 SPG7Q9UQ90 795 aa9.7□□□□□ -0.86
VPS13D-212ENST00000543766 TTC34A8MYJ7 566 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 LILRB3O75022 631 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 IDH1O75874 414 aaKnown RBP9.69□□□□□ -0.86
VPS13D-212ENST00000543766 FBXO21O94952 628 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 IFIT2P09913 472 aaKnown RBP9.69□□□□□ -0.86
VPS13D-212ENST00000543766 COL6A1P12109 1028 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 PBLDP30039 288 aaPredicted RBP9.69□□□□□ -0.86
VPS13D-212ENST00000543766 CLCN6P51797 869 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 GJA9P57773 515 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 PPP1R7Q15435 360 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 ARHGAP29Q52LW3 1261 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 OTUD7BQ6GQQ9 843 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 RSRC2Q7L4I2 434 aaKnown RBP9.69□□□□□ -0.86
VPS13D-212ENST00000543766 RASSF3Q86WH2 238 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 USP38Q8NB14 1042 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 ZNF653Q96CK0 615 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 SIKE1Q9BRV8 207 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 FAM167BQ9BTA0 163 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 TRPV6Q9H1D0 765 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 C14orf93Q9H972 538 aaKnown RBP9.69□□□□□ -0.86
VPS13D-212ENST00000543766 TCP11L1Q9NUJ3 509 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS13D-212ENST00000543766 LUZP4Q9P127 313 aa9.69□□□□□ -0.86
VPS13D-212ENST00000543766 ZNF624Q9P2J8 865 aaPredicted RBP9.69□□□□□ -0.86
VPS13D-212ENST00000543766 CCPG1Q9ULG6 757 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms