RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 RTN1Q16799 776 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 C8orf74Q6P047 294 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 TSGA10Q9BZW7 698 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 ZC3H12CQ9C0D7 883 aaKnown RBP18.8■□□□□ 0.6
NELFA-216ENST00000542778 EHD2Q9NZN4 543 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 PCDHAC2Q9Y5I4 1007 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 FAM205CA6NFA0 338 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 PLEKHA8P1O95397 391 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 FAM153BP0C7A2 387 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 SLURP2P0DP57 97 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 FAM153CQ494X1 144 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 ANKRD20A8PQ5CZ79 823 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 C12orf60Q5U649 245 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 PPP4R3AQ6IN85 833 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 NFRKBQ6P4R8 1299 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 FANCBQ8NB91 859 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 C1orf131Q8NDD1 294 aaKnown RBP18.8■□□□□ 0.6
NELFA-216ENST00000542778 AGPAT5Q9NUQ2 364 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 FAM153AQ9UHL3 310 aa18.8■□□□□ 0.6
NELFA-216ENST00000542778 CLSTN1O94985 981 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 SLC8A1P32418 973 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 RHBDL3P58872 404 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 MREGQ8N565 214 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 TTYH3Q9C0H2 523 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 ARPP21Q9UBL0 812 aaPredicted RBP18.79■□□□□ 0.6
NELFA-216ENST00000542778 LRWD1Q9UFC0 647 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 NID2Q14112 1375 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 NAV1Q8NEY1 1877 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 USP17L3A6NCW0 530 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 USP17L4A6NCW7 530 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 HMGB1P1B2RPK0 211 aaPredicted RBP18.79■□□□□ 0.6
NELFA-216ENST00000542778 H7C1D1 291 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 ZNF263O14978 683 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 TACC1O75410 805 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 ALDH1B1P30837 517 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 TBC1D8BQ0IIM8 1120 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
NELFA-216ENST00000542778 ZNF658Q5TYW1 1059 aaPredicted RBP18.79■□□□□ 0.6
NELFA-216ENST00000542778 USP17L1Q7RTZ2 530 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 KIRREL3Q8IZU9 778 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 ZNHIT6Q9NWK9 470 aaKnown RBP18.79■□□□□ 0.6
NELFA-216ENST00000542778 NFU1Q9UMS0 254 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 HYOU1Q9Y4L1 999 aa18.79■□□□□ 0.6
NELFA-216ENST00000542778 PES1O00541 588 aaKnown RBP18.78■□□□□ 0.6
NELFA-216ENST00000542778 DEXIO95424 95 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 TCP1P17987 556 aaKnown RBP18.78■□□□□ 0.6
NELFA-216ENST00000542778 CARSP49589 748 aaKnown RBP18.78■□□□□ 0.6
NELFA-216ENST00000542778 GRIK3Q13003 919 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 GLE1Q53GS7 698 aaKnown RBP18.78■□□□□ 0.6
NELFA-216ENST00000542778 CCDC181Q5TID7 509 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 IFT20Q8IY31 132 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 FERMT2Q96AC1 680 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 PPANQ9NQ55 473 aaKnown RBP18.78■□□□□ 0.6
NELFA-216ENST00000542778 GDF3Q9NR23 364 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 IL17RBQ9NRM6 502 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 RBM12Q9NTZ6 932 aaKnown RBP18.78■□□□□ 0.6
NELFA-216ENST00000542778 SCN9AQ15858 1988 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 GPR75-ASB3A0A0A6YYF3 556 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 CXCR5P32302 372 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 CCNHP51946 323 aaPredicted RBP18.78■□□□□ 0.6
NELFA-216ENST00000542778 PPP4CP60510 307 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 SBK1Q52WX2 424 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 RNF217Q8TC41 542 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 PSMB7Q99436 277 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 STK32BQ9NY57 414 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 MAPK8IP1Q9UQF2 711 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 DAGLAQ9Y4D2 1042 aa18.78■□□□□ 0.6
NELFA-216ENST00000542778 TRIM49BA6NDI0 452 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 TSPY2A6NKD2 308 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 BAG3O95817 575 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 GLI1P08151 1106 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 GSTO1P78417 241 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 IFFO1Q0D2I5 559 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 NAA25Q14CX7 972 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 CCDC96Q2M329 555 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 RCSD1Q6JBY9 416 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 DHX37Q8IY37 1157 aaKnown RBP18.77■□□□□ 0.6
NELFA-216ENST00000542778 C3orf20Q8ND61 904 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 MTRQ99707 1265 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 RBM28Q9NW13 759 aaKnown RBP18.77■□□□□ 0.6
NELFA-216ENST00000542778 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 GDAQ9Y2T3 454 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 MYH6P13533 1939 aa18.77■□□□□ 0.6
NELFA-216ENST00000542778 RASSF10A6NK89 507 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 OPLAHO14841 1288 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 GTPBP6O43824 516 aaPredicted RBP18.77■□□□□ 0.59
NELFA-216ENST00000542778 PRCPP42785 496 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 SCTRP47872 440 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 SLC8A3P57103 927 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 TFAP4Q01664 338 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 TROAPQ12815 778 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 XRCC4Q13426 336 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 PICALMQ13492 652 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 PDXDC2PQ6P474 469 aa18.77■□□□□ 0.59
NELFA-216ENST00000542778 CRACR2BQ8N4Y2 399 aaPredicted RBP18.77■□□□□ 0.59
NELFA-216ENST00000542778 RGPD3A6NKT7 1758 aaPredicted RBP18.76■□□□□ 0.59
NELFA-216ENST00000542778 RGPD4Q7Z3J3 1758 aa18.76■□□□□ 0.59
NELFA-216ENST00000542778 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms