RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CCDC169A6NNP5 214 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 GAS7O60861 476 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 AFPP02771 609 aaKnown RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 PLA2G4BP0C869 781 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 KRT5P13647 590 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 NR1D1P20393 614 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 GRM4Q14833 912 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 SETDB1Q15047 1291 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 BEND6Q5SZJ8 279 aaPredicted RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 SLFN13Q68D06 897 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 FBXO11Q86XK2 927 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 NSUN4Q96CB9 384 aaKnown RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 PBKQ96KB5 322 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 CCDC17Q96LX7 622 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 TCHPQ9BT92 498 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 IMPG2Q9BZV3 1241 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 VIPAS39Q9H9C1 493 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 PSD3Q9NYI0 1048 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 PARP2Q9UGN5 583 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 HDAC9Q9UKV0 1011 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 L1RE1Q9UN81 338 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 COL15A1P39059 1388 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 PALMO75781 387 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 FOSP01100 380 aaPredicted RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 FERP16591 822 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 SCNN1DP51172 638 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 SMTNP53814 917 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 GFPT1Q06210 699 aaPredicted RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 STK4Q13043 487 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 CCDC93Q567U6 631 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM83BQ5T0W9 1011 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 C10orf76Q5T2E6 689 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 PROM2Q8N271 834 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 IFT74Q96LB3 600 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 ARHGEF10LQ9HCE6 1279 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 BAIAP2L1Q9UHR4 511 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 FEZ2Q9UHY8 353 aaPredicted RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 SNX12Q9UMY4 172 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 ZBTB22O15209 634 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 ZNF185O15231 689 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 SARSP49591 514 aaKnown RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 PDCLQ13371 301 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 UBE2SQ16763 222 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 CERKLQ49MI3 558 aaPredicted RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 CCNI2Q6ZMN8 369 aaPredicted RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 KCTD1Q719H9 257 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 AMNQ9BXJ7 453 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 EFCC1Q9HA90 598 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 VEZTQ9HBM0 779 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 RABGAP1Q9Y3P9 1069 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 PSMD14O00487 310 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 MAP2K2P36507 400 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 C12orf60Q5U649 245 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 SRLQ86TD4 932 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 RSRC1Q96IZ7 334 aaKnown RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 LRRC1Q9BTT6 524 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 HOMER3Q9NSC5 361 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 LARSQ9P2J5 1176 aaKnown RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 PPP1R1BQ9UD71 204 aaPredicted RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 DAAM1Q9Y4D1 1078 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 KDM6AO15550 1401 aaPredicted RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 A0A1B0GUA9 196 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 DDX39AO00148 427 aaKnown RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 HGSO14964 777 aaPredicted RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 LMNB1P20700 586 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 ERVK-24P63145 666 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 ZBTB16Q05516 673 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 RSRC2Q7L4I2 434 aaKnown RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 TADA2BQ86TJ2 420 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 GIMAP8Q8ND71 665 aaPredicted RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 UHMK1Q8TAS1 419 aaKnown RBP8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 PNKPQ96T60 521 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM114A2Q9NRY5 505 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 CEP72Q9P209 647 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 PCDHA6Q9UN73 950 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 PCDHA8Q9Y5H6 950 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM169AQ9Y6X4 670 aa8.97□□□□□ -0.97
PRKAB1-207ENST00000542698 PNMA6FA0A0J9YX94 578 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 MEIS1O00470 390 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 CLIC2O15247 247 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 ALDH3A1P30838 453 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 LACTBP83111 547 aaPredicted RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 DHX9Q08211 1270 aaKnown RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 BIRC3Q13489 604 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 ZYXQ15942 572 aaKnown RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 CCDC6Q16204 474 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 WDR44Q5JSH3 913 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 NT5DC1Q5TFE4 455 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 RIN2Q8WYP3 895 aaPredicted RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 HPS3Q969F9 1004 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 MAGOHBQ96A72 148 aaKnown RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 FNBP1Q96RU3 617 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 EDEM3Q9BZQ6 932 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 SRP68Q9UHB9 627 aaKnown RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 ANAPC4Q9UJX5 808 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 ATP8A1Q9Y2Q0 1164 aa8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 HMGB1P1B2RPK0 211 aaPredicted RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 N4BP1O75113 896 aaKnown RBP8.96□□□□□ -0.97
PRKAB1-207ENST00000542698 GAS8O95995 478 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms