RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 BTAF1O14981 1849 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 PLIN4Q96Q06 1357 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 RGPD3A6NKT7 1758 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 RGPD4Q7Z3J3 1758 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 ABCB11O95342 1321 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 NHSQ6T4R5 1651 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 PVALEFA0A1B0GWK0 134 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 ANO9A1A5B4 782 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 TARSL2A2RTX5 802 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 SMCO2A6NFE2 343 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 ERICH4A6NGS2 130 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 hCG_1984214I3L0E3 225 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 TULP2O00295 520 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 EDIL3O43854 480 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 ZPR1O75312 459 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 LCA5LO95447 670 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 ATP1A1P05023 1023 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 GNA11P29992 359 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 CYLC1P35663 651 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 CDK8P49336 464 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 AARSP49588 968 aaKnown RBP eCLIP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 KCNQ4P56696 695 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 AMPD3Q01432 767 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 TBC1D8BQ0IIM8 1120 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 GPS2Q13227 327 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 CASP8Q14790 479 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 NCAPH2Q6IBW4 605 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 PTF1AQ7RTS3 328 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF572Q7Z3I7 529 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 NEK8Q86SG6 692 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF713Q8N859 430 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 KIAA0895Q8NCT3 520 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 CCDC47Q96A33 483 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 JAKMIP2Q96AA8 810 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 CNOT6LQ96LI5 555 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 LACRTQ9GZZ8 138 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 SEMA6BQ9H3T3 888 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 RIOX1Q9H6W3 641 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 VIPAS39Q9H9C1 493 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 NHEJ1Q9H9Q4 299 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 PDE11AQ9HCR9 933 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 C6orf50Q9HD87 102 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 BLOC1S4Q9NUP1 217 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 GUCA1BQ9UMX6 200 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 JAG2Q9Y219 1238 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 SIK3Q9Y2K2 1263 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 SAR1BQ9Y6B6 198 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 LY75O60449 1722 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 FOCADQ5VW36 1801 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 TAF1LQ8IZX4 1826 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 GAKO14976 1311 aa5.79□□□□□ -1.48
ATPAF1-212ENST00000542495 C10orf71Q711Q0 1435 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF263O14978 683 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 HOXA2O43364 376 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 KRT86O43790 486 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CCNT1O60563 726 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 RPS6KA5O75582 802 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 EIF3JO75822 258 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 RHOXF2BP0C7M4 288 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 GOLGA8HP0CJ92 632 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 FCER1AP12319 257 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 IL1R1P14778 569 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 MCM3P25205 808 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 YY1P25490 414 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 KLK7P49862 253 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 VAV2P52735 878 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 NAPAP54920 295 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 RHBDL3P58872 404 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 EHHADHQ08426 723 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 VAC14Q08AM6 782 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 GRB10Q13322 594 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 NFIXQ14938 502 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 LETM2Q2VYF4 491 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 SLC4A8Q2Y0W8 1093 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CCDC122Q5T0U0 273 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 UNC13DQ70J99 1090 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF804AQ7Z570 1209 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 SLC51AQ86UW1 340 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 AMIGO3Q86WK7 504 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 MAPKAPK5Q8IW41 473 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 CCDC24Q8N4L8 307 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 NEK11Q8NG66 645 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 RASSF8Q8NHQ8 419 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 RRP36Q96EU6 259 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PNMA5Q96PV4 448 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 MMS19Q96T76 1030 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 EYA3Q99504 573 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PLIN2Q99541 437 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 RHOXF2Q9BQY4 288 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 SUGCTQ9HAC7 445 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNHIT6Q9NWK9 470 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 HDAC6Q9UBN7 1215 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 STK17AQ9UEE5 414 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PCDHGC3Q9UN70 934 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 STX8Q9UNK0 236 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 PLAGL2Q9UPG8 496 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 ZC3H4Q9UPT8 1303 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 IGKV6D-41A0A0C4DH26 115 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 MYMKA6NI61 221 aa5.78□□□□□ -1.48
ATPAF1-212ENST00000542495 LRRIQ3A6PVS8 624 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms