RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RBM17Q96I25 401 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 STRBPQ96SI9 672 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 TSGA10Q9BZW7 698 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 TRIM6Q9C030 488 aaPredicted RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 ARMT1Q9H993 441 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 INCENPQ9NQS7 918 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 VPS54Q9P1Q0 977 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CAPN11Q9UMQ6 739 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 XDHP47989 1333 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 A0A1W2PQC6 194 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 LGALS16A8MUM7 142 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CHUKO15111 745 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 GTPBP6O43824 516 aaPredicted RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 TACC1O75410 805 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 KRT2P35908 639 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 MTIF2P46199 727 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 EVX2Q03828 476 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CTDSPL2Q05D32 466 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 KIF5AQ12840 1032 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 NEDD9Q14511 834 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 UBE3CQ15386 1083 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CCDC40Q4G0X9 1142 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 ZNF658Q5TYW1 1059 aaPredicted RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 SMCR8Q8TEV9 937 aaPredicted RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 CTNNBL1Q8WYA6 563 aaPredicted RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 ARHGEF1Q92888 912 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 SPDL1Q96EA4 605 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 CALML4Q96GE6 196 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 PYM1Q9BRP8 204 aaKnown RBP5.76□□□□□ -1.49
PROM1-220ENST00000540805 KRT23Q9C075 422 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 ZSWIM5Q9P217 1185 aa5.76□□□□□ -1.49
PROM1-220ENST00000540805 RP1L1Q8IWN7 2480 aaPredicted RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 ZNF532Q9HCE3 1301 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 FAM205CA6NFA0 338 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 SPDYE3A6NKU9 549 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 H7C1D1 291 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 MAP3K13O43283 966 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 RTN2O75298 545 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 ZBTB7AO95365 584 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 ECEL1O95672 775 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 PDE6AP16499 860 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 YY1P25490 414 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 GYG1P46976 350 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 ITIH3Q06033 890 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 DLGAP5Q15398 846 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 EZH2Q15910 746 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 CCDC178Q5BJE1 867 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 WDR59Q6PJI9 974 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 NIM1KQ8IY84 436 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 CCDC170Q8IYT3 715 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 SPATA5Q8NB90 893 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 TSEN2Q8NCE0 465 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 SPDYE1Q8NFV5 336 aaPredicted RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 LRRC1Q9BTT6 524 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 LACRTQ9GZZ8 138 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 PRDM16Q9HAZ2 1276 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 TMEM165Q9HC07 324 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 LUC7LQ9NQ29 371 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 DMGDHQ9UI17 866 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 SNX12Q9UMY4 172 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 MINPP1Q9UNW1 487 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 IVNS1ABPQ9Y6Y0 642 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 GSG1L2A8MUP6 293 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 USO1O60763 962 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 VAV2P52735 878 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 ALX1Q15699 326 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 MEA1Q16626 185 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 DPY19L2Q6NUT2 758 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 YTHDF3Q7Z739 585 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 CMTR1Q8N1G2 835 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 TRIM58Q8NG06 486 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 CAVIN3Q969G5 261 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 SHISA4Q96DD7 197 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 PURBQ96QR8 312 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 PAGR1Q9BTK6 254 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.75□□□□□ -1.49
PROM1-220ENST00000540805 ANKRD2Q9GZV1 360 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 BSDC1Q9NW68 430 aaPredicted RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 STIM2Q9P246 746 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 PDS5AQ29RF7 1337 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 MYH2Q9UKX2 1941 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 RCCD1A6NED2 376 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 C21orf2O43822 256 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 CSPG5O95196 566 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 KIF4AO95239 1232 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 GCFC2P16383 781 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 TRIM21P19474 475 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 EEF1GP26641 437 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 PPARAQ07869 468 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 MKRN3Q13064 507 aaKnown RBP5.75□□□□□ -1.49
PROM1-220ENST00000540805 NNTQ13423 1086 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 SPA17Q15506 151 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 MFSD14BQ5SR56 506 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 NAA35Q5VZE5 725 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 KDM7AQ6ZMT4 941 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 TXNRD3Q86VQ6 643 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 C2CD5Q86YS7 1000 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 SEPT12Q8IYM1 358 aa5.75□□□□□ -1.49
PROM1-220ENST00000540805 MICAL1Q8TDZ2 1067 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms