RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 PPTC7Q8NI37 304 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 CAGE1Q8TC20 777 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 AFAP1L1Q8TED9 768 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 SYMPKQ92797 1274 aaKnown RBP20.02■□□□□ 0.8
PDCD2-207ENST00000539212 BCAS3Q9H6U6 928 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 RIOX1Q9H6W3 641 aa20.02■□□□□ 0.8
PDCD2-207ENST00000539212 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
PDCD2-207ENST00000539212 PRRC2BQ5JSZ5 2229 aaKnown RBP20.02■□□□□ 0.79
PDCD2-207ENST00000539212 TTC28Q96AY4 2481 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 HAS3O00219 553 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 NBNO60934 754 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 GGPS1O95749 300 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 CKBP12277 381 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 SELPP16109 830 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 UBA1P22314 1058 aaKnown RBP20.01■□□□□ 0.79
PDCD2-207ENST00000539212 DEFB103AP81534 67 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 TROAPQ12815 778 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 LAMC2Q13753 1193 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 WTAPQ15007 396 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 RALYLQ86SE5 291 aaKnown RBP20.01■□□□□ 0.79
PDCD2-207ENST00000539212 CCDC155Q8N6L0 562 aa20.01■□□□□ 0.79
PDCD2-207ENST00000539212 SIP14410 1827 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 LCHNA4D1U4 455 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 SGSM2O43147 1006 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 WDR5P61964 334 aaKnown RBP20■□□□□ 0.79
PDCD2-207ENST00000539212 TAP1Q03518 808 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 COL9A3Q14050 684 aaPredicted RBP20■□□□□ 0.79
PDCD2-207ENST00000539212 MYSM1Q5VVJ2 828 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 TRAF7Q6Q0C0 670 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 VSIG10LQ86VR7 867 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 NCOA7Q8NI08 942 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 RUFY2Q8WXA3 655 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 ARNTL2Q8WYA1 636 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 SPATA33Q96N06 139 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 ASB2Q96Q27 587 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 MYL10Q9BUA6 226 aa20■□□□□ 0.79
PDCD2-207ENST00000539212 ERICH2A1L162 156 aa19.99■□□□□ 0.79
PDCD2-207ENST00000539212 GCOM1H8Y6P7 765 aaPredicted RBP19.99■□□□□ 0.79
PDCD2-207ENST00000539212 POLR2MP0CAP2 368 aa19.99■□□□□ 0.79
PDCD2-207ENST00000539212 RBL2Q08999 1139 aa19.99■□□□□ 0.79
PDCD2-207ENST00000539212 TRIM71Q2Q1W2 868 aaKnown RBP19.99■□□□□ 0.79
PDCD2-207ENST00000539212 CELF3Q5SZQ8 465 aaKnown RBP19.99■□□□□ 0.79
PDCD2-207ENST00000539212 MB21D2Q8IYB1 491 aaPredicted RBP19.99■□□□□ 0.79
PDCD2-207ENST00000539212 ATXN2LQ8WWM7 1075 aaKnown RBP19.99■□□□□ 0.79
PDCD2-207ENST00000539212 KATNAL1Q9BW62 490 aa19.99■□□□□ 0.79
PDCD2-207ENST00000539212 BAIAP3O94812 1187 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 HOXD8P13378 290 aaPredicted RBP19.98■□□□□ 0.79
PDCD2-207ENST00000539212 CCND2P30279 289 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 KCNJ6P48051 423 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 TFF2Q03403 129 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 MBTPS1Q14703 1052 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 ZNF618Q5T7W0 954 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 PHOSPHO2Q8TCD6 241 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 ADAMTS19Q8TE59 1207 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 MAP3K20Q9NYL2 800 aaKnown RBP19.98■□□□□ 0.79
PDCD2-207ENST00000539212 TELO2Q9Y4R8 837 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 RBM8AQ9Y5S9 174 aaKnown RBP19.98■□□□□ 0.79
PDCD2-207ENST00000539212 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
PDCD2-207ENST00000539212 PNMA6FA0A0J9YX94 578 aa19.97■□□□□ 0.79
PDCD2-207ENST00000539212 TLL1O43897 1013 aa19.97■□□□□ 0.79
PDCD2-207ENST00000539212 MRPS9P82933 396 aaKnown RBP19.97■□□□□ 0.79
PDCD2-207ENST00000539212 CNKSR3Q6P9H4 555 aa19.97■□□□□ 0.79
PDCD2-207ENST00000539212 IGDCC4Q8TDY8 1250 aa19.97■□□□□ 0.79
PDCD2-207ENST00000539212 C16orf70Q9BSU1 422 aa19.97■□□□□ 0.79
PDCD2-207ENST00000539212 TNFRSF10AO00220 468 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 CXCL10P02778 98 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 MRPS5P82675 430 aaKnown RBP19.96■□□□□ 0.79
PDCD2-207ENST00000539212 SEMA3FQ13275 785 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 PTK7Q13308 1070 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 CATIPQ7Z7H3 387 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 MAP4K1Q92918 833 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 NECAB3Q96P71 396 aaPredicted RBP19.96■□□□□ 0.79
PDCD2-207ENST00000539212 LY9Q9HBG7 655 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 FRMPD4Q14CM0 1322 aa19.96■□□□□ 0.79
PDCD2-207ENST00000539212 RXRAP19793 462 aa19.95■□□□□ 0.78
PDCD2-207ENST00000539212 SART3Q15020 963 aaKnown RBP19.95■□□□□ 0.78
PDCD2-207ENST00000539212 SKIV2LQ15477 1246 aaKnown RBP19.95■□□□□ 0.78
PDCD2-207ENST00000539212 FAM117BQ6P1L5 589 aa19.95■□□□□ 0.78
PDCD2-207ENST00000539212 KCNV1Q6PIU1 500 aa19.95■□□□□ 0.78
PDCD2-207ENST00000539212 RAB11FIP4Q86YS3 637 aa19.95■□□□□ 0.78
PDCD2-207ENST00000539212 ZNF654Q8IZM8 581 aa19.95■□□□□ 0.78
PDCD2-207ENST00000539212 MLXIPQ9HAP2 919 aa19.95■□□□□ 0.78
PDCD2-207ENST00000539212 RTEL1Q9NZ71 1219 aa19.95■□□□□ 0.78
PDCD2-207ENST00000539212 NLRC5Q86WI3 1866 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 KIF28PB7ZC32 967 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 PPFIA4O75335 1185 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 PLEKHA8P1O95397 391 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 LGALS2P05162 132 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 KCNQ1P51787 676 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 GRB10Q13322 594 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 USP17L6PQ6QN14 398 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 TRIM50Q86XT4 487 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 CMTR1Q8N1G2 835 aaKnown RBP19.94■□□□□ 0.78
PDCD2-207ENST00000539212 SAMD3Q8N6K7 520 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 GDPD5Q8WTR4 605 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 MTUS1Q9ULD2 1270 aa19.94■□□□□ 0.78
PDCD2-207ENST00000539212 PRC1O43663 620 aa19.93■□□□□ 0.78
PDCD2-207ENST00000539212 LPXNO60711 386 aa19.93■□□□□ 0.78
PDCD2-207ENST00000539212 SMIM10L2AP0DMW4 78 aa19.93■□□□□ 0.78
PDCD2-207ENST00000539212 SMIM10L2BP0DMW5 78 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms