RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SLC15A2Q16348 729 aa19.92■□□□□ 0.78
GNE-204ENST00000539208 KIF4BQ2VIQ3 1234 aa19.92■□□□□ 0.78
GNE-204ENST00000539208 ZCWPW2Q504Y3 356 aa19.92■□□□□ 0.78
GNE-204ENST00000539208 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
GNE-204ENST00000539208 KIAA1024Q9UPX6 916 aa19.92■□□□□ 0.78
GNE-204ENST00000539208 SIK3Q9Y2K2 1263 aa19.92■□□□□ 0.78
GNE-204ENST00000539208 PLA2G4BP0C869 781 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 SREBF1P36956 1147 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 KLK7P49862 253 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 CCDC65Q8IXS2 484 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 CSRNP1Q96S65 589 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 P2RX7Q99572 595 aaKnown RBP19.91■□□□□ 0.78
GNE-204ENST00000539208 EIF3CLB5ME19 914 aaKnown RBP19.91■□□□□ 0.78
GNE-204ENST00000539208 PPIP5K2O43314 1243 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 CIITAP33076 1130 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 SPIRE1Q08AE8 756 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 FAM26FQ5R3K3 315 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 HAUS3Q68CZ6 603 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 PCMTD1Q96MG8 357 aaPredicted RBP19.91■□□□□ 0.78
GNE-204ENST00000539208 EIF3CQ99613 913 aaKnown RBP19.91■□□□□ 0.78
GNE-204ENST00000539208 PCDHA2Q9Y5H9 948 aa19.91■□□□□ 0.78
GNE-204ENST00000539208 E9PMD0 336 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 NKRFO15226 690 aaKnown RBP eCLIP19.9■□□□□ 0.78
GNE-204ENST00000539208 ZRANB2O95218 330 aaKnown RBP eCLIP19.9■□□□□ 0.78
GNE-204ENST00000539208 HERVK_113P62684 666 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 FKBP3Q00688 224 aaKnown RBP19.9■□□□□ 0.78
GNE-204ENST00000539208 TRAF1Q13077 416 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 RRP1BQ14684 758 aaKnown RBP19.9■□□□□ 0.78
GNE-204ENST00000539208 KRT222Q8N1A0 295 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 FAM20AQ96MK3 541 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 NHEJ1Q9H9Q4 299 aaPredicted RBP19.9■□□□□ 0.78
GNE-204ENST00000539208 PITPNM2Q9BZ72 1349 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 FRMD3A2A2Y4 597 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 SPDYE3A6NKU9 549 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 ATP8B1O43520 1251 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 RXRBP28702 533 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 CHMP4BP1P59074 171 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 WHAMMP3Q1A5X7 153 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 TMCO3Q6UWJ1 677 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 LENG9Q96B70 501 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 PLAGL2Q9UPG8 496 aa19.9■□□□□ 0.78
GNE-204ENST00000539208 A0A1W2PRG0 241 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 POTEB3A0JP26 581 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 POTECB2RU33 542 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 PIK3CDO00329 1044 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 PSMD14O00487 310 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 KIF20AO95235 890 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 CYP3A4P08684 503 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 IKQ13123 557 aaPredicted RBP19.89■□□□□ 0.77
GNE-204ENST00000539208 LRRC41Q15345 812 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 TEX35Q5T0J7 233 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 POTEBQ6S5H4 581 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 ARHGAP27Q6ZUM4 889 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 ERMNQ8TAM6 284 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 CEP63Q96MT8 703 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 EDEM3Q9BZQ6 932 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 TMOD2Q9NZR1 351 aa19.89■□□□□ 0.77
GNE-204ENST00000539208 SPDYE2BA6NHP3 402 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 MED24O75448 989 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 SPDYE6P0CI01 402 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 CYP11B2P19099 503 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 RSBN1LQ6PCB5 846 aaPredicted RBP19.88■□□□□ 0.77
GNE-204ENST00000539208 GPBP1Q86WP2 473 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 EHBP1Q8NDI1 1231 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 GLIS3Q8NEA6 775 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.88■□□□□ 0.77
GNE-204ENST00000539208 OPLAHO14841 1288 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 RPA1P27694 616 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 SLC12A3P55017 1021 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 AMPD2Q01433 879 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 USH1GQ495M9 461 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 PRR16Q569H4 304 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 ARHGEF10LQ9HCE6 1279 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 PRR12Q9ULL5 1215 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 GUCA1BQ9UMX6 200 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 COL4A3BPQ9Y5P4 624 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 FHOD1Q9Y613 1164 aa19.88■□□□□ 0.77
GNE-204ENST00000539208 KRT86O43790 486 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 IPO7O95373 1038 aaKnown RBP19.87■□□□□ 0.77
GNE-204ENST00000539208 GNA14O95837 355 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 SSBP05455 408 aaKnown RBP eCLIP19.87■□□□□ 0.77
GNE-204ENST00000539208 SNAP25P60880 206 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 KCTD17Q8N5Z5 321 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 FAM151AQ8WW52 585 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 C21orf2O43822 256 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 STAT3P40763 770 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 MARSP56192 900 aaKnown RBP19.87■□□□□ 0.77
GNE-204ENST00000539208 ARSHQ5FYA8 562 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 CCDC122Q5T0U0 273 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 CATSPER3Q86XQ3 398 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 GMLQ99445 158 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 PSMD1Q99460 953 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 STK32BQ9NY57 414 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 TMX2Q9Y320 296 aa19.87■□□□□ 0.77
GNE-204ENST00000539208 FAM86B1E9PN63 330 aa19.86■□□□□ 0.77
GNE-204ENST00000539208 VIL1P09327 827 aaKnown RBP19.86■□□□□ 0.77
GNE-204ENST00000539208 FAM86B2P0C5J1 330 aa19.86■□□□□ 0.77
GNE-204ENST00000539208 ZSCAN20P17040 1043 aaPredicted RBP19.86■□□□□ 0.77
GNE-204ENST00000539208 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
GNE-204ENST00000539208 ZC3H3Q8IXZ2 948 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms