RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TEX2Q8IWB9 1127 aa20.44■□□□□ 0.86
DDX55-204ENST00000536079 DAGLBQ8NCG7 672 aa20.44■□□□□ 0.86
DDX55-204ENST00000536079 AFG1LQ8WV93 481 aa20.44■□□□□ 0.86
DDX55-204ENST00000536079 STAM2O75886 525 aa20.43■□□□□ 0.86
DDX55-204ENST00000536079 EARS2Q5JPH6 523 aaKnown RBP20.43■□□□□ 0.86
DDX55-204ENST00000536079 CELF3Q5SZQ8 465 aaKnown RBP20.43■□□□□ 0.86
DDX55-204ENST00000536079 CXCL17Q6UXB2 119 aa20.43■□□□□ 0.86
DDX55-204ENST00000536079 MXRA8Q9BRK3 442 aa20.43■□□□□ 0.86
DDX55-204ENST00000536079 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
DDX55-204ENST00000536079 SPC25Q9HBM1 224 aa20.43■□□□□ 0.86
DDX55-204ENST00000536079 JADE2Q9NQC1 790 aa20.43■□□□□ 0.86
DDX55-204ENST00000536079 FAM86B1E9PN63 330 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 GGPS1O95749 300 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 GH1P01241 217 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 FAM86B2P0C5J1 330 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 ARP10275 920 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 MYSM1Q5VVJ2 828 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 SLC39A5Q6ZMH5 540 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 BICD2Q8TD16 824 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 PPP1R13LQ8WUF5 828 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 UIMC1Q96RL1 719 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 PKD2L1Q9P0L9 805 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 GRIN2DO15399 1336 aa20.42■□□□□ 0.86
DDX55-204ENST00000536079 ALPK3Q96L96 1907 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 FAM205CA6NFA0 338 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 A6NJR5 290 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 FIBPO43427 364 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 CYP3A4P08684 503 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 KCNA2P16389 499 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 PSMC6P62333 389 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 GUCY1B3Q02153 619 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 GNPTABQ3T906 1256 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 KRT40Q6A162 431 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 DHX37Q8IY37 1157 aaKnown RBP20.41■□□□□ 0.86
DDX55-204ENST00000536079 PCSK9Q8NBP7 692 aaKnown RBP20.41■□□□□ 0.86
DDX55-204ENST00000536079 WASF1Q92558 559 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 DPF3Q92784 378 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 GPRASP2Q96D09 838 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 EHMT1Q9H9B1 1298 aa20.41■□□□□ 0.86
DDX55-204ENST00000536079 IGLV3-22A0A075B6J6 115 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 MOXD2PA6NHM9 499 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 MEIS1O00470 390 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 MMP3P08254 477 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 MYL3P08590 195 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 TGFB3P10600 412 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 PURAQ00577 322 aaKnown RBP20.4■□□□□ 0.86
DDX55-204ENST00000536079 NR5A1Q13285 461 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 HSDL1Q3SXM5 330 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 CEP55Q53EZ4 464 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 KCNV1Q6PIU1 500 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 CYFIP1Q7L576 1253 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 NLRX1Q86UT6 975 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 TNFRSF25Q93038 417 aa20.4■□□□□ 0.86
DDX55-204ENST00000536079 EMID1Q96A84 441 aaPredicted RBP20.4■□□□□ 0.86
DDX55-204ENST00000536079 MCM2P49736 904 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 CPT1AP50416 773 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 MTMR1Q13613 665 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 LAMC2Q13753 1193 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 SNX17Q15036 470 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 TRIM60Q495X7 471 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 GALNT17Q6IS24 598 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 FAM177A1Q8N128 213 aaPredicted RBP20.39■□□□□ 0.85
DDX55-204ENST00000536079 TBCKQ8TEA7 893 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 SPATA33Q96N06 139 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 HTATIP2Q9BUP3 242 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 STARD7Q9NQZ5 370 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 KCNH7Q9NS40 1196 aa20.39■□□□□ 0.85
DDX55-204ENST00000536079 MMP1P03956 469 aa20.38■□□□□ 0.85
DDX55-204ENST00000536079 RTP1P59025 263 aa20.38■□□□□ 0.85
DDX55-204ENST00000536079 ITGB3BPQ13352 177 aaPredicted RBP20.38■□□□□ 0.85
DDX55-204ENST00000536079 IL27Q8NEV9 243 aa20.38■□□□□ 0.85
DDX55-204ENST00000536079 PPTC7Q8NI37 304 aa20.38■□□□□ 0.85
DDX55-204ENST00000536079 KAT2BQ92831 832 aa20.38■□□□□ 0.85
DDX55-204ENST00000536079 LENG9Q96B70 501 aa20.38■□□□□ 0.85
DDX55-204ENST00000536079 MLXIPQ9HAP2 919 aa20.38■□□□□ 0.85
DDX55-204ENST00000536079 AGO4Q9HCK5 861 aaKnown RBP20.38■□□□□ 0.85
DDX55-204ENST00000536079 BTBD18B2RXH4 712 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 XBP1P17861 261 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 CIITAP33076 1130 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 ZNF76P36508 570 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 INF2Q27J81 1249 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 MCTP2Q6DN12 878 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 C7orf61Q8IZ16 206 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 VTI1AQ96AJ9 217 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 SENP7Q9BQF6 1050 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 ATP11BQ9Y2G3 1177 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 MYH7BA7E2Y1 1941 aa20.37■□□□□ 0.85
DDX55-204ENST00000536079 ELP1O95163 1332 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 ZEB2O60315 1214 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 EVI5O60447 810 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 TDP2O95551 362 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 HOXD8P13378 290 aaPredicted RBP20.36■□□□□ 0.85
DDX55-204ENST00000536079 KRT2P35908 639 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 CDK7P50613 346 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 HMGN5P82970 282 aaKnown RBP20.36■□□□□ 0.85
DDX55-204ENST00000536079 SP4Q02446 784 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 CUL4AQ13619 759 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 NEDD9Q14511 834 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 METTL7BQ6UX53 244 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 PIK3AP1Q6ZUJ8 805 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms