RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 PRRC2BQ5JSZ5 2229 aaKnown RBP13.2□□□□□ -0.3
CPNE7-206ENST00000532500 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
CPNE7-206ENST00000532500 IQCF3P0C7M6 154 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 ATP2A2P16615 1042 aaKnown RBP13.19□□□□□ -0.3
CPNE7-206ENST00000532500 UBA1P22314 1058 aaKnown RBP13.19□□□□□ -0.3
CPNE7-206ENST00000532500 MCM5P33992 734 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 MFSD10Q14728 455 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 RAB30Q15771 203 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 KIAA0753Q2KHM9 967 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 TMCO2Q7Z6W1 182 aaPredicted RBP13.19□□□□□ -0.3
CPNE7-206ENST00000532500 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
CPNE7-206ENST00000532500 SPATA33Q96N06 139 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
CPNE7-206ENST00000532500 COL25A1Q9BXS0 654 aaPredicted RBP13.19□□□□□ -0.3
CPNE7-206ENST00000532500 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
CPNE7-206ENST00000532500 TMEM265A0A087WTH1 108 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 BFSP2Q13515 415 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 LAMC2Q13753 1193 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 UBE2SQ16763 222 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 HSDL1Q3SXM5 330 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 CELF3Q5SZQ8 465 aaKnown RBP13.18□□□□□ -0.3
CPNE7-206ENST00000532500 MYSM1Q5VVJ2 828 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 PPP2R2DQ66LE6 453 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 VSIG10LQ86VR7 867 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
CPNE7-206ENST00000532500 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
CPNE7-206ENST00000532500 WNT8BQ93098 351 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 PKD2L1Q9P0L9 805 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
CPNE7-206ENST00000532500 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 EVPLQ92817 2033 aa13.18□□□□□ -0.3
CPNE7-206ENST00000532500 MYH9P35579 1960 aaKnown RBP13.18□□□□□ -0.3
CPNE7-206ENST00000532500 RFXAPO00287 272 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 DDAH1O94760 285 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 ACTN1P12814 892 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 KIF5BP33176 963 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 MRPS9P82933 396 aaKnown RBP13.17□□□□□ -0.3
CPNE7-206ENST00000532500 GHRHRQ02643 423 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 PTPN11Q06124 597 aaPredicted RBP13.17□□□□□ -0.3
CPNE7-206ENST00000532500 HIC1Q14526 733 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 PPTC7Q8NI37 304 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
CPNE7-206ENST00000532500 NAP1L2Q9ULW6 460 aaPredicted RBP13.17□□□□□ -0.3
CPNE7-206ENST00000532500 SPTBN5Q9NRC6 3674 aaKnown RBP13.17□□□□□ -0.3
CPNE7-206ENST00000532500 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 CA3P07451 260 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 TRAF1Q13077 416 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 ADGRE1Q14246 886 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 TCTN1Q2MV58 587 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
CPNE7-206ENST00000532500 FAM117BQ6P1L5 589 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 LRRC8DQ7L1W4 858 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 TRIM50Q86XT4 487 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 CCDC155Q8N6L0 562 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 CUL5Q93034 780 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 MAF1Q9H063 256 aa13.16□□□□□ -0.3
CPNE7-206ENST00000532500 BDP1A6H8Y1 2624 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 NOP56O00567 594 aaKnown RBP13.15□□□□□ -0.3
CPNE7-206ENST00000532500 ARHGEF15O94989 841 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 F2P00734 622 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 CKBP12277 381 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 SELPP16109 830 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 SEMA3FQ13275 785 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 NECTIN1Q15223 517 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 CENPQQ7L2Z9 268 aaPredicted RBP13.15□□□□□ -0.3
CPNE7-206ENST00000532500 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 SPRED2Q7Z698 418 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
CPNE7-206ENST00000532500 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 KATNAL1Q9BW62 490 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
CPNE7-206ENST00000532500 PCDHA11Q9Y5I1 949 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
CPNE7-206ENST00000532500 ATG2AQ2TAZ0 1938 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 HAS3O00219 553 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 MEIS2O14770 477 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 LGALS2P05162 132 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 PFKMP08237 780 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 CTSHP09668 335 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 CPA1P15085 419 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 RFC2P35250 354 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 THPOP40225 353 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 KCNJ6P48051 423 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 DEFB103AP81534 67 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 GPNMBQ14956 572 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 KCNV1Q6PIU1 500 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 CAGE1Q8TC20 777 aa13.14□□□□□ -0.31
CPNE7-206ENST00000532500 AFAP1L1Q8TED9 768 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms