RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 HAS3O00219 553 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 GH1P01241 217 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 RSPH10BP0C881 870 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 ICAM3P32942 547 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 COASYQ13057 564 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 HIC1Q14526 733 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 CEP85Q6P2H3 762 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 CLASRPQ8N2M8 674 aaKnown RBP16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 CLEC4DQ8WXI8 215 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 MPHOSPH6Q99547 160 aaKnown RBP16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 PHF7Q9BWX1 381 aaPredicted RBP16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 IFIH1Q9BYX4 1025 aaKnown RBP16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 DMXL1Q9Y485 3027 aa16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 EP300Q09472 2414 aaPredicted RBP16.44■□□□□ 0.22
NKX3-1-202ENST00000523261 MMP1P03956 469 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 TSPY3P0CV98 308 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 TSPY8P0CW00 308 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 CAMK1Q14012 370 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 MFSD10Q14728 455 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 DGKDQ16760 1214 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 PTPN21Q16825 1174 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 LY6KQ17RY6 165 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 RNF207Q6ZRF8 634 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 ADSSL1Q8N142 457 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 NKD2Q969F2 451 aaPredicted RBP16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 IL17RAQ96F46 866 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 RIPOR3Q96MK2 946 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 HAUS7Q99871 368 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 EPB41L4AQ9HCS5 686 aaPredicted RBP16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 USP15Q9Y4E8 981 aaPredicted RBP16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 DNAH14Q0VDD8 3507 aa16.43■□□□□ 0.22
NKX3-1-202ENST00000523261 CSPG5O95196 566 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 F2P00734 622 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 ATP5JP18859 108 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 THPOP40225 353 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 KIAA0753Q2KHM9 967 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 CHST3Q7LGC8 479 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 FRMD5Q7Z6J6 570 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 SEPT8Q92599 483 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 RPGRIP1Q96KN7 1286 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 KATNAL1Q9BW62 490 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 RWDD3Q9Y3V2 267 aa16.42■□□□□ 0.22
NKX3-1-202ENST00000523261 TFAP4Q01664 338 aa16.41■□□□□ 0.22
NKX3-1-202ENST00000523261 ZSCAN25Q6NSZ9 544 aa16.41■□□□□ 0.22
NKX3-1-202ENST00000523261 SERINC5Q86VE9 423 aa16.41■□□□□ 0.22
NKX3-1-202ENST00000523261 EFHBQ8N7U6 833 aa16.41■□□□□ 0.22
NKX3-1-202ENST00000523261 CLP1Q92989 425 aaKnown RBP16.41■□□□□ 0.22
NKX3-1-202ENST00000523261 GLP2RO95838 553 aa16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 ZNF286BP0CG31 522 aa16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 ADGRD2Q7Z7M1 963 aa16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 TMEM105Q8N8V8 129 aa16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 RC3H2Q9HBD1 1191 aaKnown RBP16.4■□□□□ 0.22
NKX3-1-202ENST00000523261 ACACBO00763 2458 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 B4DLN1 442 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 SLC16A2P36021 539 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 TDO2P48775 406 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 MCTP2Q6DN12 878 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 PPP2R3CQ969Q6 453 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 EMID1Q96A84 441 aaPredicted RBP16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 RMDN1Q96DB5 314 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 BARX2Q9UMQ3 279 aaPredicted RBP16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 STX8Q9UNK0 236 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 ADGRA3Q8IWK6 1321 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 KIAA1217Q5T5P2 1943 aa16.39■□□□□ 0.21
NKX3-1-202ENST00000523261 ATF7P17544 494 aaPredicted RBP16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 DNAJB1P25685 340 aa16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 SYDE2Q5VT97 1194 aa16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 SUSD6Q92537 303 aa16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 MTMR7Q9Y216 660 aa16.38■□□□□ 0.21
NKX3-1-202ENST00000523261 HOXD8P13378 290 aaPredicted RBP16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 DGLUCYQ7Z3D6 616 aa16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 ITPRIPQ8IWB1 547 aa16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 BCL11AQ9H165 835 aa16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 DDX41Q9UJV9 622 aaKnown RBP16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 CEP250Q9BV73 2442 aa16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 ZFHX4Q86UP3 3567 aa16.37■□□□□ 0.21
NKX3-1-202ENST00000523261 NRIP1P48552 1158 aa16.36■□□□□ 0.21
NKX3-1-202ENST00000523261 PPTC7Q8NI37 304 aa16.36■□□□□ 0.21
NKX3-1-202ENST00000523261 DCAF4Q8WV16 495 aa16.36■□□□□ 0.21
NKX3-1-202ENST00000523261 APBB2Q92870 758 aa16.36■□□□□ 0.21
NKX3-1-202ENST00000523261 P2RX5Q93086 422 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms