RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 CDCA5Q96FF9 252 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 CCDC114Q96M63 670 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 FRMD6Q96NE9 622 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 TRERF1Q96PN7 1200 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 TRIM8Q9BZR9 551 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 VRTNQ9H8Y1 702 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 CYP4F11Q9HBI6 524 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 TMEM165Q9HC07 324 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 CD209Q9NNX6 404 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 KCNQ5Q9NR82 932 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 TCP11L1Q9NUJ3 509 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 MTUS1Q9ULD2 1270 aa8.36□□□□□ -1.07
HDAC3-216ENST00000523088 TTF2Q9UNY4 1162 aaKnown RBP8.36□□□□□ -1.07
HDAC3-216ENST00000523088 RPAP1Q9BWH6 1393 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 GAKO14976 1311 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 GOLGA6L9A6NEM1 432 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 SMTNL1A8MU46 457 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 ADM5C9JUS6 153 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 ATP8B1O43520 1251 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 CYTH3O43739 400 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 DNAJC6O75061 913 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 MYL3P08590 195 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 GNAT2P19087 354 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 LBX1P52954 281 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 BPIFB3P59826 476 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 GTF2IP78347 998 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 GRM1Q13255 1194 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 TNFAIP1Q13829 316 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 KIF22Q14807 665 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 USH1GQ495M9 461 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 INO80DQ53TQ3 878 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 CAVIN4Q5BKX8 364 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 HYIQ5T013 277 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 CDCA2Q69YH5 1023 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF746Q6NUN9 644 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 UNC5DQ6UXZ4 953 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 CYP26C1Q6V0L0 522 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 TNIP2Q8NFZ5 429 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 RSAD2Q8WXG1 361 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 ARHGEF2Q92974 986 aaKnown RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 ZMAT2Q96NC0 199 aaKnown RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 HAUS7Q99871 368 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 API5Q9BZZ5 524 aaKnown RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 ZSCAN16Q9H4T2 348 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-216ENST00000523088 CNNM2Q9H8M5 875 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 PLEKHA5Q9HAU0 1116 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 SPTLC3Q9NUV7 552 aa8.35□□□□□ -1.07
HDAC3-216ENST00000523088 MAST3O60307 1309 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 TTC34A8MYJ7 566 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 WNT10BO00744 389 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 CASQ2O14958 399 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 ATP6V1G1O75348 118 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 EGFRP00533 1210 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 SLC10A3P09131 477 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 NCAM1P13591 858 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 RPS2P15880 293 aaKnown RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 ATP5DP30049 168 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 GCKP35557 465 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 CAP2P40123 477 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 GEMIN4P57678 1058 aaKnown RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 PHEXP78562 749 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 BASP1P80723 227 aaKnown RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 AMPD3Q01432 767 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 TOMM20Q15388 145 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 DLGAP5Q15398 846 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 THOC7Q6I9Y2 204 aaKnown RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 CAVIN1Q6NZI2 390 aaKnown RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 JAZF1Q86VZ6 243 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 VPS37DQ86XT2 251 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 KIAA0825Q8IV33 1275 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 CEP57L1Q8IYX8 460 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF397Q8NF99 534 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 FLCNQ8NFG4 579 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 GCC1Q96CN9 775 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 PGBD4Q96DM1 585 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 NACAP1Q9BZK3 213 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 TRIM4Q9C037 500 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF700Q9H0M5 742 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 DNAJC25Q9H1X3 360 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 SH3GLB2Q9NR46 395 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 ARGLU1Q9NWB6 273 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF510Q9Y2H8 683 aa8.34□□□□□ -1.07
HDAC3-216ENST00000523088 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-216ENST00000523088 CASP8AP2Q9UKL3 1982 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 FAM205AQ6ZU69 1335 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 IRS2Q9Y4H2 1338 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 ENO4A6NNW6 628 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 HNRNPCL2B2RXH8 293 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 PRRT4C9JH25 899 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 POLR3GO15318 223 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 HNRNPCL1O60812 293 aaKnown RBP8.33□□□□□ -1.08
HDAC3-216ENST00000523088 ZNF254O75437 659 aa8.33□□□□□ -1.08
HDAC3-216ENST00000523088 CYP1A2P05177 515 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms