RNA–Protein interactions for RNA: ENST00000520462.5

TSNARE1-206, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-206ENST00000520462 TPCN1Q9ULQ1 816 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 FRMPD4Q14CM0 1322 aa17.7■□□□□ 0.42
TSNARE1-206ENST00000520462 STAM2O75886 525 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 GH1P01241 217 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 CPT1AP50416 773 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 NKX3-2P78367 333 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 GNPTABQ3T906 1256 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 TMEM63BQ5T3F8 832 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 CCSAPQ6IQ19 270 aaPredicted RBP17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 TYW1BQ6NUM6 668 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 XRRA1Q6P2D8 792 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 MYLIPQ8WY64 445 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 TTYH1Q9H313 450 aaPredicted RBP17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 C6orf50Q9HD87 102 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 PCDHA6Q9UN73 950 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 PCDHA8Q9Y5H6 950 aa17.69■□□□□ 0.42
TSNARE1-206ENST00000520462 PFKFB2O60825 505 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 CABYRO75952 493 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 DEXIO95424 95 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 FOSP01100 380 aaPredicted RBP17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 PTGS1P23219 599 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 GNA11P29992 359 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 SCRN1Q12765 414 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 PKN1Q16512 942 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 LY6KQ17RY6 165 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 PCNX4Q63HM2 1172 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 MAFAQ8NHW3 353 aaPredicted RBP17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 COPS5Q92905 334 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 ZFP91Q96JP5 570 aaPredicted RBP17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 ELP1O95163 1332 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 MROH7Q68CQ1 1323 aa17.68■□□□□ 0.42
TSNARE1-206ENST00000520462 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 CTAGE5O15320 804 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 ARIH2O95376 493 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 TIMP1P01033 207 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 AP3B2Q13367 1082 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 CCDC62Q6P9F0 684 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 NLRX1Q86UT6 975 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 COL25A1Q9BXS0 654 aaPredicted RBP17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 POLR3EQ9NVU0 708 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 RTEL1Q9NZ71 1219 aa17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 DDX41Q9UJV9 622 aaKnown RBP17.67■□□□□ 0.42
TSNARE1-206ENST00000520462 A0A0U1RQG5 324 aaPredicted RBP17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 MYL3P08590 195 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 TGFB3P10600 412 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 FOSL2P15408 326 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 NLRP5P59047 1200 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 CXCL17Q6UXB2 119 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 DHX37Q8IY37 1157 aaKnown RBP17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 ANO3Q9BYT9 981 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 PPP1R12CQ9BZL4 782 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 ZMYND12Q9H0C1 365 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 SH3GLB2Q9NR46 395 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 TBX21Q9UL17 535 aa17.66■□□□□ 0.42
TSNARE1-206ENST00000520462 EYSQ5T1H1 3165 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 ARVCFO00192 962 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 TLR3O15455 904 aaKnown RBP17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 FIBPO43427 364 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 KPNA6O60684 536 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 RGS20O76081 388 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 CDK7P50613 346 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 MRPS9P82933 396 aaKnown RBP17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 JAKMIP3Q5VZ66 844 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 MFSD5Q6N075 450 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 REXO1Q8N1G1 1221 aaKnown RBP17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 INPP4AQ96PE3 977 aaPredicted RBP17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 DOCK5Q9H7D0 1870 aa17.65■□□□□ 0.42
TSNARE1-206ENST00000520462 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 GGPS1O95749 300 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 XBP1P17861 261 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 ARHGAP1Q07960 439 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 PPIGQ13427 754 aaKnown RBP eCLIP17.64■□□□□ 0.415e-7■■■□□ 18
TSNARE1-206ENST00000520462 RABEP1Q15276 862 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 ME3Q16798 604 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 AFG1LQ8WV93 481 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 WASF1Q92558 559 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 GTF3C6Q969F1 213 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 CDHR1Q96JP9 859 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 PGBD1Q96JS3 809 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 MLXIPQ9HAP2 919 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 CDH23Q9H251 3354 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 STK36Q9NRP7 1315 aa17.64■□□□□ 0.41
TSNARE1-206ENST00000520462 A6NJR5 290 aa17.63■□□□□ 0.41
TSNARE1-206ENST00000520462 CSF2RAP15509 400 aa17.63■□□□□ 0.41
TSNARE1-206ENST00000520462 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
TSNARE1-206ENST00000520462 DNAJB2P25686 324 aa17.63■□□□□ 0.41
TSNARE1-206ENST00000520462 ICAM3P32942 547 aa17.63■□□□□ 0.41
TSNARE1-206ENST00000520462 ZNF76P36508 570 aa17.63■□□□□ 0.41
TSNARE1-206ENST00000520462 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
TSNARE1-206ENST00000520462 NEDD9Q14511 834 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms