RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 EMC9Q9Y3B6 208 aa6.17□□□□□ -1.42
HMGB1P23-201ENST00000518743 FHOD1Q9Y613 1164 aa6.17□□□□□ -1.42
HMGB1P23-201ENST00000518743 NUP155O75694 1391 aa6.17□□□□□ -1.42
HMGB1P23-201ENST00000518743 CCDC7Q96M83 1385 aa6.17□□□□□ -1.42
HMGB1P23-201ENST00000518743 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
HMGB1P23-201ENST00000518743 PIEZO1Q92508 2521 aa6.17□□□□□ -1.42
HMGB1P23-201ENST00000518743 VCANP13611 3396 aa6.17□□□□□ -1.42
HMGB1P23-201ENST00000518743 YTHDC2Q9H6S0 1430 aaKnown RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 TAF1LQ8IZX4 1826 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 A0A0A0MRY4 1105 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 SHISA8B8ZZ34 492 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 C9IYK1 514 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 TIAF1O95411 115 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 ELNP15502 786 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 DGKGP49619 791 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 DHCR24Q15392 516 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 NKG7Q16617 165 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 C21orf62-AS1Q17RA5 79 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 FOXB2Q5VYV0 432 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 RNF219Q5W0B1 726 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 UBE2R2Q712K3 238 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 CNTROBQ8N137 903 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 TMEM130Q8N3G9 435 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 ARHGEF39Q8N4T4 335 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 AFAP1L2Q8N4X5 818 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 GIMAP7Q8NHV1 300 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 SYTL5Q8TDW5 730 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 PTPRN2Q92932 1015 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 FGD4Q96M96 766 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 KREMEN1Q96MU8 473 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 DPH2Q9BQC3 489 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 IER2Q9BTL4 223 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 GP6Q9HCN6 339 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 FAM86C1Q9NVL1 165 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 KCNK4Q9NYG8 393 aa6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 G3BP2Q9UN86 482 aaKnown RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 KDM6AO15550 1401 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P23-201ENST00000518743 UBR3Q6ZT12 1888 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 TMEM265A0A087WTH1 108 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 AQP7O14520 342 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 SART1O43290 800 aaKnown RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 DDNO94850 711 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 NEFMP07197 916 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 IGFALSP35858 605 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 COL9A3Q14050 684 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 CBX2Q14781 532 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 RGL3Q3MIN7 710 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 PRRT3Q5FWE3 981 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 ZNF385CQ66K41 422 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 DCAF15Q66K64 600 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 CNNM4Q6P4Q7 775 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 C1orf229Q6ZS94 237 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 MRGPRX3Q96LB0 322 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 TARS2Q9BW92 718 aaKnown RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 ASCC2Q9H1I8 757 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 NOP53Q9NZM5 478 aaKnown RBP6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 APEX2Q9UBZ4 518 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 FBXL21Q9UKT6 434 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 ZNF451Q9Y4E5 1061 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 C4BP0C0L5 1744 aa6.15□□□□□ -1.42
HMGB1P23-201ENST00000518743 RPGRIP1LQ68CZ1 1315 aa6.15□□□□□ -1.43
HMGB1P23-201ENST00000518743 PKD1L2Q7Z442 2459 aa6.15□□□□□ -1.43
HMGB1P23-201ENST00000518743 SCN4AP35499 1836 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 GAS2O43903 313 aaKnown RBP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 IL2RBP14784 551 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 KCNA3P22001 575 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 CHRNA5P30532 468 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 CDKN1CP49918 316 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 USP11P51784 963 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 BRDTQ58F21 947 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 LETMD1Q6P1Q0 360 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 JAMLQ86YT9 394 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 FMNL3Q8IVF7 1028 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 SVOPQ8N4V2 548 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 GSTCDQ8NEC7 633 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 OSBP2Q969R2 916 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 C8orf48Q96LL4 319 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 MAGEB10Q96LZ2 347 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 PSMD1Q99460 953 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 TAF1DQ9H5J8 278 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 DDX21Q9NR30 783 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 CGGBP1Q9UFW8 167 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 NDOR1Q9UHB4 597 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 HDAC9Q9UKV0 1011 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 KCNH3Q9ULD8 1083 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 RNF112Q9ULX5 631 aa6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 RANBP2P49792 3224 aaKnown RBP6.14□□□□□ -1.43
HMGB1P23-201ENST00000518743 TOGARAM1Q9Y4F4 1720 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 LAMB4A4D0S4 1761 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 TRPM7Q96QT4 1865 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 E2F8A0AVK6 867 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 GNB5O14775 395 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 OPA1O60313 960 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 CAPNS1P04632 268 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 ITIH2P19823 946 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 GUCY2FP51841 1108 aa6.13□□□□□ -1.43
HMGB1P23-201ENST00000518743 NEK4P51957 841 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms