RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SLC16A2P36021 539 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 FXR2P51116 673 aaKnown RBP eCLIP20.38■□□□□ 0.859e-14■□□□□ 8.9
SDC2-202ENST00000518385 RAD51AP2Q09MP3 1159 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 HSP90B2PQ58FF3 399 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 GRAMD1CQ8IYS0 662 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 EHBP1Q8NDI1 1231 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 ACER1Q8TDN7 264 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 RUBCNQ92622 972 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 MTMR9Q96QG7 549 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 AMNQ9BXJ7 453 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 MRPL44Q9H9J2 332 aaKnown RBP20.38■□□□□ 0.85
SDC2-202ENST00000518385 GOPCQ9HD26 462 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 L1RE1Q9UN81 338 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 WDR90Q96KV7 1748 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 ECE1P42892 770 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 USP11P51784 963 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 AP3B2Q13367 1082 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 CDC37Q16543 378 aaPredicted RBP20.38■□□□□ 0.85
SDC2-202ENST00000518385 TMEM266Q2M3C6 531 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 SYDE2Q5VT97 1194 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 SAMSN1Q9NSI8 373 aaKnown RBP20.38■□□□□ 0.85
SDC2-202ENST00000518385 PCDHA1Q9Y5I3 950 aa20.38■□□□□ 0.85
SDC2-202ENST00000518385 SLC26A4O43511 780 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 PLA2G6O60733 806 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 INPP5BP32019 993 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 RBL2Q08999 1139 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 CALCRLQ16602 461 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 MOXD1Q6UVY6 613 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 KRT26Q7Z3Y9 468 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 PNMA8AQ86V59 439 aaPredicted RBP20.37■□□□□ 0.85
SDC2-202ENST00000518385 ANKZF1Q9H8Y5 726 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 TMEM260Q9NX78 707 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.37■□□□□ 0.85
SDC2-202ENST00000518385 RWDD2AQ9UIY3 292 aa20.37■□□□□ 0.85
SDC2-202ENST00000518385 ADM5C9JUS6 153 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 RAD21O60216 631 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 FOSP01100 380 aaPredicted RBP20.36■□□□□ 0.85
SDC2-202ENST00000518385 HOXA7P31268 230 aaPredicted RBP20.36■□□□□ 0.85
SDC2-202ENST00000518385 KCNB1Q14721 858 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 KARSQ15046 597 aaKnown RBP20.36■□□□□ 0.85
SDC2-202ENST00000518385 RAD9BQ6WBX8 426 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 CABP7Q86V35 215 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 RASSF8Q8NHQ8 419 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 KLRG1Q96E93 195 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 KBTBD4Q9NVX7 518 aa20.36■□□□□ 0.85
SDC2-202ENST00000518385 SSC5DA1L4H1 1573 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 ATAD5Q96QE3 1844 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 AMPD3Q01432 767 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 GOLGA8FQ08AF8 430 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 GOLGA8DPQ0D2H9 430 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 ZNF569Q5MCW4 686 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 FBXO11Q86XK2 927 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 SCYL3Q8IZE3 742 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 GOLGA6L1Q8N7Z2 621 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 IQCDQ96DY2 449 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 WRNIP1Q96S55 665 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 RASSF4Q9H2L5 321 aa20.35■□□□□ 0.85
SDC2-202ENST00000518385 FEZ2Q9UHY8 353 aaPredicted RBP20.35■□□□□ 0.85
SDC2-202ENST00000518385 TARSL2A2RTX5 802 aaKnown RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 SOWAHDA6NJG2 315 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 USP2O75604 605 aaPredicted RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 CKAP4Q07065 602 aaKnown RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 ZNF658Q5TYW1 1059 aaPredicted RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 NEK11Q8NG66 645 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 CALML4Q96GE6 196 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 MED15Q96RN5 788 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 HAUS4Q9H6D7 363 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 VCPKMTQ9H867 229 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 EFCC1Q9HA90 598 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 CYP3A7-CYP3A51PA0A087WV96 503 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 PPP1R3GB7ZBB8 358 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 RPN1P04843 607 aaKnown RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 CYP3A7P24462 503 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 EAPPQ56P03 285 aaPredicted RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 NAALADL2Q58DX5 795 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 KIAA1755Q5JYT7 1200 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 DLK2Q6UY11 383 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 TRMT44Q8IYL2 757 aaKnown RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 NOC3LQ8WTT2 800 aaKnown RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 CHURC1Q8WUH1 139 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 CCDC47Q96A33 483 aaKnown RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 DESI2Q9BSY9 194 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 GLIS2Q9BZE0 524 aaPredicted RBP20.34■□□□□ 0.85
SDC2-202ENST00000518385 FAM107BQ9H098 131 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 STK17AQ9UEE5 414 aa20.34■□□□□ 0.85
SDC2-202ENST00000518385 A0A1W2PQC6 194 aa20.33■□□□□ 0.84
SDC2-202ENST00000518385 PPP1R2P41236 205 aa20.33■□□□□ 0.84
SDC2-202ENST00000518385 AARSP49588 968 aaKnown RBP eCLIP20.33■□□□□ 0.84
SDC2-202ENST00000518385 STAT2P52630 851 aa20.33■□□□□ 0.84
SDC2-202ENST00000518385 NOL9Q5SY16 702 aaKnown RBP20.33■□□□□ 0.84
SDC2-202ENST00000518385 CCDC84Q86UT8 332 aaPredicted RBP20.33■□□□□ 0.84
SDC2-202ENST00000518385 FAM160B2Q86V87 743 aa20.33■□□□□ 0.84
SDC2-202ENST00000518385 POTEDQ86YR6 584 aa20.33■□□□□ 0.84
SDC2-202ENST00000518385 BBXQ8WY36 941 aaPredicted RBP20.33■□□□□ 0.84
SDC2-202ENST00000518385 ZKSCAN4Q969J2 545 aaPredicted RBP20.33■□□□□ 0.84
SDC2-202ENST00000518385 MTRQ99707 1265 aa20.33■□□□□ 0.84
SDC2-202ENST00000518385 FZD1Q9UP38 647 aa20.33■□□□□ 0.84
SDC2-202ENST00000518385 PTPRAP18433 802 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 TECP42680 631 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 IKQ13123 557 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms