RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 HERVK_113P62684 666 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SP3Q02447 781 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PLS1Q14651 629 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KIF22Q14807 665 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 Q6ZVU0 165 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RUFY3Q7L099 469 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RASGRP2Q7LDG7 609 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RAB11FIP4Q86YS3 637 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PRPF38AQ8NAV1 312 aaKnown RBP6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GPRC5AQ8NFJ5 357 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZNF296Q8WUU4 475 aaPredicted RBP6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DCAF4Q8WV16 495 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 EDEM1Q92611 657 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ATG4CQ96DT6 458 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 IFT43Q96FT9 208 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GMCL1Q96IK5 515 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FAM161BQ96MY7 647 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MTA3Q9BTC8 594 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PHACTR1Q9C0D0 580 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 UBA5Q9GZZ9 404 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PDRG1Q9NUG6 133 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RNF19AQ9NV58 838 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KLK14Q9P0G3 267 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RBPJLQ9UBG7 517 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FEM1BQ9UK73 627 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SLC12A7Q9Y666 1083 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SH2B2O14492 632 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SCAMP3O14828 347 aaKnown RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DHX16O60231 1041 aaKnown RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 BCRP11274 1271 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RXRAP19793 462 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RPS6KB1P23443 525 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SLC16A2P36021 539 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 LIFRP42702 1097 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 STAT2P52630 851 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ANAPC15P60006 121 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SNAP25P60880 206 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CCNA1P78396 465 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZNF543Q08ER8 600 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FOXC1Q12948 553 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 WDR78Q5VTH9 848 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FAM160B2Q86V87 743 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CCDC144CPQ8IYA2 1237 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZNF654Q8IZM8 581 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CPXCR1Q8N123 301 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GJD3Q8N144 294 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CTCFLQ8NI51 663 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ALKBH8Q96BT7 664 aaKnown RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ITPKCQ96DU7 683 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ERO1AQ96HE7 468 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CFHR5Q9BXR6 569 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NIFKQ9BYG3 293 aaKnown RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 UPF3BQ9BZI7 483 aaKnown RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TM6SF1Q9BZW5 370 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CPVLQ9H3G5 476 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZNF395Q9H8N7 513 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 LY9Q9HBG7 655 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TXNRD2Q9NNW7 524 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PPP1R9AQ9ULJ8 1098 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PRR12Q9ULL5 1215 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RABGAP1Q9Y3P9 1069 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MYH8P13535 1937 aa6.74□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ATAD5Q96QE3 1844 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 LAMB1P07942 1786 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KLF18A0A0U1RQI7 1052 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KLRF2D3W0D1 207 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 VWA5AO00534 786 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZIC2O95409 532 aaPredicted RBP6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PDGFAP04085 211 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CALM1P0DP23 149 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CALM2P0DP24 149 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CALM3P0DP25 149 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SNHG28P0DPA3 235 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 STAT3P40763 770 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PSMC4P43686 418 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NEK4P51957 841 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ERVK-24P63145 666 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DAB2P98082 770 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RELBQ01201 579 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TROAPQ12815 778 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GRM4Q14833 912 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TMEM132BQ14DG7 1078 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ARHGEF6Q15052 776 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FAM110CQ1W6H9 321 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ASPRV1Q53RT3 343 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GPATCH4Q5T3I0 446 aaKnown RBP6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SYDE2Q5VT97 1194 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TMEM214Q6NUQ4 689 aaKnown RBP6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CCDC174Q6PII3 467 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 LBX2Q6XYB7 198 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SGMS1Q86VZ5 419 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NCAPG2Q86XI2 1143 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MB21D1Q8N884 522 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FANCBQ8NB91 859 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms