RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 ZBTB43O43298 467 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 DUSP11O75319 330 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 GHRHRQ02643 423 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 PRPF38BQ5VTL8 546 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 CCSAPQ6IQ19 270 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 SYNE3Q6ZMZ3 975 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 MCF2L2Q86YR7 1114 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 ARRDC4Q8NCT1 418 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 LZTS2Q9BRK4 669 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 AGXT2Q9BYV1 514 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
UBE2D3-232ENST00000514755 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 KBTBD13C9JR72 458 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 C6orf222P0C671 652 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 NDUFV2P19404 249 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 EIF2AK2P19525 551 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 PSMA5P28066 241 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 GNAQP50148 359 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 GJA9P57773 515 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 FGD1P98174 961 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 BEX3Q00994 111 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 TNFAIP2Q03169 654 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 TOB2Q14106 344 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 RTN1Q16799 776 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 C7orf61Q8IZ16 206 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 GPKOWQ92917 476 aaPredicted RBP eCLIP12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 HLA-CQ95604 372 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 VTA1Q9NP79 307 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 NAP1L2Q9ULW6 460 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
UBE2D3-232ENST00000514755 LOC102724159A0A0B4J2E5 919 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 ARIH2O95376 493 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 POLR2MP0CAP2 368 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 PWP2Q15269 919 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 KCNA10Q16322 511 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 ARHGEF16Q5VV41 709 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 RNF180Q86T96 592 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 FBXL16Q8N461 479 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 COPS5Q92905 334 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 WDR11Q9BZH6 1224 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 UPF3AQ9H1J1 476 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 SEC63Q9UGP8 760 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 PHF24Q9UPV7 400 aa12.72□□□□□ -0.37
UBE2D3-232ENST00000514755 A0A1W2PQ45 241 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 A0A1W2PQY0 241 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 MEIS2O14770 477 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 DYNC1LI2O43237 492 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 SYN1P17600 705 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 ACLYP53396 1101 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 C8orf34Q49A92 452 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 USP17L6PQ6QN14 398 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 SLC39A5Q6ZMH5 540 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 TLK2Q86UE8 772 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 NSUN6Q8TEA1 469 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 PDCD2LQ9BRP1 358 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 TM6SF1Q9BZW5 370 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 MAF1Q9H063 256 aa12.71□□□□□ -0.37
UBE2D3-232ENST00000514755 RGS20O76081 388 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 ASGR1P07306 291 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 NR3C2P08235 984 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 CST5P28325 142 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 PDIA3P30101 505 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 RCAN1P53805 252 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 EVCP57679 992 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 RTP1P59025 263 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 NKX3-2P78367 333 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 CCT2P78371 535 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 PGM5Q15124 567 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 TRIM60Q495X7 471 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 DUSP28Q4G0W2 176 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 GNASQ5JWF2 1037 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 SEPT14Q6ZU15 432 aa12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 NCOA5Q9HCD5 579 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 CYP46A1Q9Y6A2 500 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms