RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 LRRC27Q9C0I9 530 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 PCIF1Q9H4Z3 704 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 SOX17Q9H6I2 414 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RSAD1Q9HA92 442 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 SP110Q9HB58 689 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 CCM2LQ9NUG4 571 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RNF112Q9ULX5 631 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 PHF24Q9UPV7 400 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 CORO2BQ9UQ03 480 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 LRRFIP2Q9Y608 721 aaKnown RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RRN3P2A6NIE6 340 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 RHPN2P1A8MT19 583 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 FAM227AF5H4B4 570 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 M0R3H8 397 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 GOLIM4O00461 696 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 KPNA5O15131 536 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 KDM1AO60341 852 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 AOC2O75106 756 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 RGS9O75916 674 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZRANB2O95218 330 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 CAPNS1P04632 268 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 CTSBP07858 339 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 VDRP11473 427 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 OSMP13725 252 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 KRT15P19012 456 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLC9A1P19634 815 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PEX2P28328 305 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PPM1AP35813 382 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PCBP4P57723 403 aaKnown RBP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 KRT85P78386 507 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 ID3Q02535 119 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PPFIA1Q13136 1202 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 NKG7Q16617 165 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 ARHGAP44Q17R89 818 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PRR16Q569H4 304 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZKSCAN2Q63HK3 967 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 CYB5RLQ6IPT4 315 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PSAPL1Q6NUJ1 521 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 MZT2BQ6NZ67 158 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 EP400NLQ6ZTU2 488 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 OVCH2Q7RTZ1 564 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 EFHBQ8N7U6 833 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PCDH19Q8TAB3 1148 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 NUDT8Q8WV74 236 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 SNRNP27Q8WVK2 155 aaKnown RBP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 HPS3Q969F9 1004 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 FBXW5Q969U6 566 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 GTPBP3Q969Y2 492 aaKnown RBP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 CHAMP1Q96JM3 812 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLC2A13Q96QE2 648 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZFYVE21Q9BQ24 234 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 CELF4Q9BZC1 486 aaKnown RBP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 NUP62CLQ9H1M0 184 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 BHMT2Q9H2M3 363 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 MS4A5Q9H3V2 200 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 SMOC1Q9H4F8 434 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 KIAA1586Q9HCI6 787 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPRC5CQ9NQ84 441 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 ATXN7L1Q9ULK2 861 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 CEP83Q9Y592 693 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 FHOD1Q9Y613 1164 aa4.32□□□□□ -1.72
HMGB1P22-201ENST00000505315 SOS2Q07890 1332 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 A6NCN8 305 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 ARVCFO00192 962 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 MAN1A2O60476 641 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 DTNBO60941 627 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 UBXN7O94888 489 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 POU2F2P09086 479 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 TNFSF4P23510 183 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 TECP42680 631 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPR3P46089 330 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 PRIM2P49643 509 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 CACNB3P54284 484 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 EIF5P55010 431 aaKnown RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 ERVK-24P63145 666 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 ICA1Q05084 483 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 SEMA5AQ13591 1074 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 BLMHQ13867 455 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 STARD3Q14849 445 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 CRY1Q16526 586 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 ALDH1L2Q3SY69 923 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 TOR2AQ5JU69 321 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 SPECC1Q5M775 1068 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 ATAT1Q5SQI0 421 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 ARMC3Q5W041 872 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 CWF19L1Q69YN2 538 aaKnown RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 DENND5AQ6IQ26 1287 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 IGF2-ASQ6U949 168 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 C4orf50Q6ZRC1 276 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 GET4Q7L5D6 327 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 DPP9Q86TI2 863 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 SAPCD2Q86UD0 394 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 TTC30BQ8N4P2 665 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 OR2C3Q8N628 320 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 KCT2Q8NC54 265 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 SYTL5Q8TDW5 730 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 PANK1Q8TE04 598 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms