RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 UBAP2Q5T6F2 1119 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 GKAP1Q5VSY0 366 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SAMD1Q6SPF0 538 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 CABP7Q86V35 215 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 RNF217Q8TC41 542 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 TSGA10Q9BZW7 698 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 DNAJC17Q9NVM6 304 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 TRIM33Q9UPN9 1127 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 BCS1LQ9Y276 419 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 WDR17Q8IZU2 1322 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 C1orf167Q5SNV9 1468 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 NALCNQ8IZF0 1738 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 MYH6P13533 1939 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 A0A087X0T9 212 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 TRAF5O00463 557 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 TTI1O43156 1089 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 KIF1CO43896 1103 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 KLRC4O43908 158 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 FAM228BP0C875 321 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 ERFP50548 548 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SARNPP82979 210 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SATB1Q01826 763 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 CHRNDQ07001 517 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 ZNF844Q08AG5 666 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 UAP1Q16222 522 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SOGA3Q5TF21 947 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 CCDC25Q86WR0 208 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 ELOA2Q8IYF1 753 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 LSM14BQ9BX40 385 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 TTYH3Q9C0H2 523 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 RNF41Q9H4P4 317 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SEPT11Q9NVA2 429 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 PANK4Q9NVE7 773 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 ARPP21Q9UBL0 812 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 CHORDC1Q9UHD1 332 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SAP30BPQ9UHR5 308 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 NFAT5O94916 1531 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 A0A1W2PQC6 194 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 AP1G2O75843 785 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 ANP32DO95626 131 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SHBGP04278 402 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 EPS15P42566 896 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 KCNJ2P63252 427 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 DDR1Q08345 913 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 VWA3BQ502W6 1294 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 CAVIN4Q5BKX8 364 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 FAM43BQ6ZT52 329 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 CCDC63Q8NA47 563 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 PARD3BQ8TEW8 1205 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 RSRC1Q96IZ7 334 aaKnown RBP8.37□□□□□ -1.07
NEDD9-208ENST00000504387 THAP9Q9H5L6 903 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 MCM9Q9NXL9 1143 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 WDR19Q8NEZ3 1342 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 KRIT1O00522 736 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
NEDD9-208ENST00000504387 CAND2O75155 1236 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 CCNE1P24864 410 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 ZNF211Q13398 564 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-208ENST00000504387 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-208ENST00000504387 THEMIS2Q5TEJ8 643 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 FAM47EQ6ZV65 393 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 DAAM2Q86T65 1068 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 BLIDQ8IZY5 108 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 TMTC2Q8N394 836 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 STAG1Q8WVM7 1258 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 NUP58Q9BVL2 599 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 TMBIM4Q9HC24 238 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 TCP11L1Q9NUJ3 509 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 PLAGL2Q9UPG8 496 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 PRPF3O43395 683 aaKnown RBP8.36□□□□□ -1.07
NEDD9-208ENST00000504387 ABCB4P21439 1286 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 RNASELQ05823 741 aaKnown RBP8.36□□□□□ -1.07
NEDD9-208ENST00000504387 TROAPQ12815 778 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 SEC23AQ15436 765 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 CCDC152Q4G0S7 254 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 BRINP3Q76B58 766 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 KIAA0895Q8NCT3 520 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 DYDC1Q8WWB3 177 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 CAVIN3Q969G5 261 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 CCDC47Q96A33 483 aaKnown RBP8.36□□□□□ -1.07
NEDD9-208ENST00000504387 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
NEDD9-208ENST00000504387 HMGB1P1B2RPK0 211 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 ATP6V1G2O95670 118 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 EPB41P11171 864 aaKnown RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 PPP2R2AP63151 447 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 ELF3P78545 371 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 IFI35P80217 286 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 KLHL30Q0D2K2 578 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 RPS6KA1Q15418 735 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 GNPTABQ3T906 1256 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 TCERG1LQ5VWI1 586 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 ANKRD42Q8N9B4 389 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 RETREG2Q8NC44 543 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 GIMAP8Q8ND71 665 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 GLG1Q92896 1179 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms