RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 DRC1Q96MC2 740 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 GMLQ99445 158 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 MCMBPQ9BTE3 642 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZNF341Q9BYN7 854 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 MEGF9Q9H1U4 602 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 GULP1Q9UBP9 304 aa3.81□□□□□ -1.8
HMGB1P35-201ENST00000503360 NPIPB8E9PQR5 432 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 IGSF3O75054 1194 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 CHGBP05060 677 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 ATP2B1P20020 1258 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 GUCY2CP25092 1073 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 MCM7P33993 719 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 INHBCP55103 352 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 COL9A2Q14055 689 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 TDRD10Q5VZ19 366 aaKnown RBP3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 FAM26EQ8N5C1 309 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 CLIC6Q96NY7 704 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 KLHL25Q9H0H3 589 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 BARX1Q9HBU1 254 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 ADAM29Q9UKF5 820 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 SLC12A7Q9Y666 1083 aa3.8□□□□□ -1.8
HMGB1P35-201ENST00000503360 SSBP05455 408 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 FGRP09769 529 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 GTF2F1P35269 517 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 SOX9P48436 509 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 AMPD2Q01433 879 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 NFATC3Q12968 1075 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 HNRNPA0Q13151 305 aaKnown RBP3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 FBXW10Q5XX13 1052 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 UNC5AQ6ZN44 842 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 CCDC81Q6ZN84 652 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 MCF2L2Q86YR7 1114 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 CPLX3Q8WVH0 158 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 FERD3LQ96RJ6 166 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 TMEM209Q96SK2 561 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 GBP3Q9H0R5 595 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 JADE2Q9NQC1 790 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 PPT2Q9UMR5 302 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZNF652Q9Y2D9 606 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 SIT1Q9Y3P8 196 aa3.79□□□□□ -1.8
HMGB1P35-201ENST00000503360 STXBP3O00186 592 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 PPM1BO75688 479 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 ZNF202O95125 648 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 FUCA1P04066 466 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 COPS5Q92905 334 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 CRBNQ96SW2 442 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 HAUS7Q99871 368 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 SYT3Q9BQG1 590 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 FTSJ1Q9UET6 329 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 MRVI1Q9Y6F6 885 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 X6R8D5 127 aa3.78□□□□□ -1.8
HMGB1P35-201ENST00000503360 NARSO43776 548 aaKnown RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 PPFIA2O75334 1257 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 TP53P04637 393 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 MLLT6P55198 1093 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 EIF6P56537 245 aaKnown RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 NANOS3P60323 173 aaKnown RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 CHRNA2Q15822 529 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 LRCH2Q5VUJ6 765 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 IQCEQ6IPM2 695 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 MILR1Q7Z6M3 343 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 CPNE8Q86YQ8 564 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 ZCCHC14Q8WYQ9 949 aaKnown RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 UBXN4Q92575 508 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 DPF3Q92784 378 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 ANAPC16Q96DE5 110 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 DNAJC2Q99543 621 aaKnown RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 TRIM8Q9BZR9 551 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 IKZF4Q9H2S9 585 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 PHAXQ9H814 394 aaKnown RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 MSL2Q9HCI7 577 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 CGGBP1Q9UFW8 167 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 STRIP2Q9ULQ0 834 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 ZFR2Q9UPR6 939 aaKnown RBP3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 TNFRSF18Q9Y5U5 241 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 SLC4A7Q9Y6M7 1214 aa3.77□□□□□ -1.81
HMGB1P35-201ENST00000503360 B4GALT4O60513 344 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 STK10O94804 968 aaKnown RBP3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 CNOT4O95628 575 aaKnown RBP3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 ETFBP38117 255 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 GTF2A2P52657 109 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 PPP2R5DQ14738 602 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 HEATR6Q6AI08 1181 aaKnown RBP3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 C19orf47Q8N9M1 422 aaKnown RBP3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 ARMC5Q96C12 935 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 TOE1Q96GM8 510 aaKnown RBP3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 SHDQ96IW2 340 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 ZNF408Q9H9D4 720 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 DTLQ9NZJ0 730 aa3.76□□□□□ -1.81
HMGB1P35-201ENST00000503360 A0A087X1B8 175 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 C22orf46C9J442 243 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 THBDP07204 575 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 GIPRP48546 466 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 PTH1RQ03431 593 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 RBL2Q08999 1139 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 ZYXQ15942 572 aaKnown RBP3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 EMC4Q5J8M3 183 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 TCTN3Q6NUS6 607 aa3.75□□□□□ -1.81
HMGB1P35-201ENST00000503360 STK32CQ86UX6 486 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms