RNA–Protein interactions for RNA: ENST00000498594.5

CRAMP1-208, Transcript of cramped chromatin regulator homolog 1, human

TSL 4

Gene CRAMP1, Length 559 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRAMP1-208	ENST00000498594	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	CNNM1	Q9NRU3	951 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	KLC4	Q9NSK0	619 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	POLR3E	Q9NVU0	708 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	SRRD	Q9UH36	339 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	PAIP2B	Q9ULR5	123 aa	Known RBP	4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	TMCO1	Q9UM00	188 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ZNF148	Q9UQR1	794 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ZNF510	Q9Y2H8	683 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	DAAM1	Q9Y4D1	1078 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	PHLPP2	Q6ZVD8	1323 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	MYPN	Q86TC9	1320 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	ZNF521	Q96K83	1311 aa		4.16	□□□□□ -1.74
CRAMP1-208	ENST00000498594	WDFY4	Q6ZS81	3184 aa		4.15	□□□□□ -1.74
CRAMP1-208	ENST00000498594	GOLGA6L4	A6NEF3	574 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594		B4DLN1	442 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PDHX	O00330	501 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	P4HA2	O15460	535 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TTI1	O43156	1089 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	MAP3K7	O43318	606 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	MGRN1	O60291	552 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	KIAA0754	O94854	1291 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	FARP2	O94887	1054 aa	Predicted RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TFRC	P02786	760 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	GJB1	P08034	283 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TROVE2	P10155	538 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	CYP2C8	P10632	490 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	BCR	P11274	1271 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SYN1	P17600	705 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	EIF4B	P23588	611 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	HIBADH	P31937	336 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	GBP2	P32456	591 aa	Predicted RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	RANBP1	P43487	201 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	AARS	P49588	968 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	GSDMD	P57764	484 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	FKBP1A	P62942	108 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PRKCZ	Q05513	592 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TCP10	Q12799	353 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PPIL2	Q13356	520 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SNAPC2	Q13487	334 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	CUL4B	Q13620	913 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TNFAIP1	Q13829	316 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SNCB	Q16143	134 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SEPT7	Q16181	437 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TWISTNB	Q3B726	338 aa	Predicted RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	CEP85L	Q5SZL2	805 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ZSCAN25	Q6NSZ9	544 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	MIS18BP1	Q6P0N0	1132 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	LCA5	Q86VQ0	697 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SKAP1	Q86WV1	359 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ERO1B	Q86YB8	467 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ZFPM1	Q8IX07	1006 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	VPS37A	Q8NEZ2	397 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TRPC4AP	Q8TEL6	797 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	DIS3L	Q8TF46	1054 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	U2AF1L4	Q8WU68	220 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	LEO1	Q8WVC0	666 aa	Predicted RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SLC35B4	Q969S0	331 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	NACC2	Q96BF6	587 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ZBTB10	Q96DT7	871 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	INTS4	Q96HW7	963 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PAWR	Q96IZ0	340 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	DEFB118	Q96PH6	123 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	IWS1	Q96ST2	819 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SENP7	Q9BQF6	1050 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	FUCA2	Q9BTY2	467 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	HTATIP2	Q9BUP3	242 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	LRRCC1	Q9C099	1032 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	OCEL1	Q9H607	264 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SNRK	Q9NRH2	765 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	DNAAF2	Q9NVR5	837 aa	Known RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	DNAI1	Q9UI46	699 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	CROT	Q9UKG9	612 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PHF24	Q9UPV7	400 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	SSX2IP	Q9Y2D8	614 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TTLL3	Q9Y4R7	772 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	NR2E3	Q9Y5X4	410 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	FAM169A	Q9Y6X4	670 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PARP14	Q460N5	1801 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ADGRA2	Q96PE1	1338 aa		4.15	□□□□□ -1.75
CRAMP1-208	ENST00000498594	C5orf42	Q9H799	3197 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TMEM110-MUSTN1	A8MSY1	372 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	FAM25E	A8MYX2	175 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	WDR46	O15213	610 aa	Known RBP	4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	BIRC5	O15392	142 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ZSCAN12	O43309	604 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	PRC1	O43663	620 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	CYTH3	O43739	400 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ADCY3	O60266	1144 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	ST18	O60284	1047 aa		4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	CLASP2	O75122	1294 aa	Known RBP	4.14	□□□□□ -1.75
CRAMP1-208	ENST00000498594	TADA3	O75528	432 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms