RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 KCTD1Q719H9 257 aa8.74□□□□□ -1.01
CDC42-205ENST00000498236 ZNF341Q9BYN7 854 aa8.74□□□□□ -1.01
CDC42-205ENST00000498236 GLT8D2Q9H1C3 349 aa8.74□□□□□ -1.01
CDC42-205ENST00000498236 CPVLQ9H3G5 476 aa8.74□□□□□ -1.01
CDC42-205ENST00000498236 VCPKMTQ9H867 229 aa8.74□□□□□ -1.01
CDC42-205ENST00000498236 C6orf50Q9HD87 102 aa8.74□□□□□ -1.01
CDC42-205ENST00000498236 GGA3Q9NZ52 723 aa8.74□□□□□ -1.01
CDC42-205ENST00000498236 CUTAO60888 179 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 LILRA1O75019 489 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 SMPD1P17405 629 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 LIG1P18858 919 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 ECE1P42892 770 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 FAM160A1Q05DH4 1040 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 TRAF1Q13077 416 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 ORC2Q13416 577 aaPredicted RBP8.73□□□□□ -1.01
CDC42-205ENST00000498236 EARS2Q5JPH6 523 aaKnown RBP8.73□□□□□ -1.01
CDC42-205ENST00000498236 NBPF12Q5TAG4 269 aaPredicted RBP8.73□□□□□ -1.01
CDC42-205ENST00000498236 SYDE2Q5VT97 1194 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 USP50Q70EL3 339 aaPredicted RBP8.73□□□□□ -1.01
CDC42-205ENST00000498236 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 CYP2U1Q7Z449 544 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 HOMER1Q86YM7 354 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 CCAR1Q8IX12 1150 aaKnown RBP8.73□□□□□ -1.01
CDC42-205ENST00000498236 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDC42-205ENST00000498236 ENGASEQ8NFI3 743 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 ACER1Q8TDN7 264 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 PIBF1Q8WXW3 757 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 MRPS27Q92552 414 aaKnown RBP8.73□□□□□ -1.01
CDC42-205ENST00000498236 LPAR1Q92633 364 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 WDR18Q9BV38 432 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 KIAA1683Q9H0B3 1180 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 VAT1LQ9HCJ6 419 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 RIC8AQ9NPQ8 531 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 ZNF358Q9NW07 568 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 PCDHA6Q9UN73 950 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 PCDHA8Q9Y5H6 950 aa8.73□□□□□ -1.01
CDC42-205ENST00000498236 BAZ2BQ9UIF8 2168 aaKnown RBP8.73□□□□□ -1.01
CDC42-205ENST00000498236 SMCO2A6NFE2 343 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 GLTPD2A6NH11 291 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 TMEM232C9JQI7 657 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 CTAGE5O15320 804 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 PRMT3O60678 531 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 PPP1R11O60927 126 aaPredicted RBP8.72□□□□□ -1.01
CDC42-205ENST00000498236 SLC16A2P36021 539 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 STAT2P52630 851 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 SNW1Q13573 536 aaKnown RBP8.72□□□□□ -1.01
CDC42-205ENST00000498236 GPR162Q16538 588 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 TTC38Q5R3I4 469 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 NOL9Q5SY16 702 aaKnown RBP8.72□□□□□ -1.01
CDC42-205ENST00000498236 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 LRSAM1Q6UWE0 723 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 CCDC73Q6ZRK6 1079 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 RBM43Q6ZSC3 357 aaKnown RBP8.72□□□□□ -1.01
CDC42-205ENST00000498236 FAM160B2Q86V87 743 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 SCYL3Q8IZE3 742 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
CDC42-205ENST00000498236 C1orf216Q8TAB5 229 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 CHURC1Q8WUH1 139 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 FERMT2Q96AC1 680 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 CLSTN2Q9H4D0 955 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 DACT1Q9NYF0 836 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 FEM1BQ9UK73 627 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 PCDHB6Q9Y5E3 794 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 SRPRBQ9Y5M8 271 aaKnown RBP8.72□□□□□ -1.01
CDC42-205ENST00000498236 WASF2Q9Y6W5 498 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 SSC5DA1L4H1 1573 aa8.72□□□□□ -1.01
CDC42-205ENST00000498236 ATAD5Q96QE3 1844 aa8.71□□□□□ -1.01
CDC42-205ENST00000498236 CCDC194A0A1B0GVG4 234 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 SYCE3A1L190 88 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 GOLGA6L3A6NEY3 463 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 TMEM229AB2RXF0 380 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 LAD1O00515 517 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 TERTO14746 1132 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 BACH1O14867 736 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 ADAMTS3O15072 1205 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 WDR46O15213 610 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 ADCY7P51828 1080 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 MRPL12P52815 198 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 USP14P54578 494 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 GDF10P55107 478 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 ATP2C1P98194 919 aaPredicted RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 NNTQ13423 1086 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 CDC37Q16543 378 aaPredicted RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 QRICH1Q2TAL8 776 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 KIAA1755Q5JYT7 1200 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 RESP18Q5W5W9 173 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 ARL6IP4Q66PJ3 421 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 PIK3AP1Q6ZUJ8 805 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 ELOA2Q8IYF1 753 aaPredicted RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 REXO1Q8N1G1 1221 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 FSIP1Q8NA03 581 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 TSEN2Q8NCE0 465 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 CUL5Q93034 780 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 DCPSQ96C86 337 aaKnown RBP8.71□□□□□ -1.02
CDC42-205ENST00000498236 KLRG1Q96E93 195 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 PRIMPOLQ96LW4 560 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 TIGD1Q96MW7 591 aa8.71□□□□□ -1.02
CDC42-205ENST00000498236 AMNQ9BXJ7 453 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms