RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 GJA8P48165 433 aa16.44■□□□□ 0.22
USP11-212ENST00000497179 MTMR1Q13613 665 aa16.44■□□□□ 0.22
USP11-212ENST00000497179 GNL2Q13823 731 aaKnown RBP16.44■□□□□ 0.22
USP11-212ENST00000497179 ANO1Q5XXA6 986 aa16.44■□□□□ 0.22
USP11-212ENST00000497179 CYP2W1Q8TAV3 490 aa16.44■□□□□ 0.22
USP11-212ENST00000497179 U2AF1L4Q8WU68 220 aaKnown RBP16.44■□□□□ 0.22
USP11-212ENST00000497179 MBOAT7Q96N66 472 aa16.44■□□□□ 0.22
USP11-212ENST00000497179 UPF3AQ9H1J1 476 aaKnown RBP16.44■□□□□ 0.22
USP11-212ENST00000497179 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
USP11-212ENST00000497179 Q9Y3F1 56 aa16.44■□□□□ 0.22
USP11-212ENST00000497179 SYNRGQ9UMZ2 1314 aa16.44■□□□□ 0.22
USP11-212ENST00000497179 VPS37CA5D8V6 355 aaPredicted RBP16.43■□□□□ 0.22
USP11-212ENST00000497179 MAFGO15525 162 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 SGPL1O95470 568 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 CAPN2P17655 700 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 UBA1P22314 1058 aaKnown RBP16.43■□□□□ 0.22
USP11-212ENST00000497179 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
USP11-212ENST00000497179 SETQ01105 290 aaPredicted RBP16.43■□□□□ 0.22
USP11-212ENST00000497179 GJC2Q5T442 439 aaPredicted RBP16.43■□□□□ 0.22
USP11-212ENST00000497179 TLK2Q86UE8 772 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 SPRYD3Q8NCJ5 442 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 LENG9Q96B70 501 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 NAP1L4Q99733 375 aaKnown RBP16.43■□□□□ 0.22
USP11-212ENST00000497179 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 KCNH7Q9NS40 1196 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
USP11-212ENST00000497179 ADAMTS4O75173 837 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 TDP2O95551 362 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 GCFC2P16383 781 aaKnown RBP16.42■□□□□ 0.22
USP11-212ENST00000497179 PTGS1P23219 599 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 GJA9P57773 515 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 NKX3-2P78367 333 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 SP2Q02086 613 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 ARHGAP1Q07960 439 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 LY6KQ17RY6 165 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 LETM2Q2VYF4 491 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 Q4G0T1 1027 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 MCTP1Q6DN14 999 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 PPP4R3AQ6IN85 833 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 PLA2G4DQ86XP0 818 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 COPS5Q92905 334 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 EMID1Q96A84 441 aaPredicted RBP16.42■□□□□ 0.22
USP11-212ENST00000497179 SENP7Q9BQF6 1050 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 MTMR6Q9Y217 621 aa16.42■□□□□ 0.22
USP11-212ENST00000497179 STX6O43752 255 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 GH1P01241 217 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 ARP10275 920 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
USP11-212ENST00000497179 KCNA2P16389 499 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 TRAPPC10P48553 1259 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 PRR16Q569H4 304 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 OR6J1Q8NGC5 347 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 AP5M1Q9H0R1 490 aa16.41■□□□□ 0.22
USP11-212ENST00000497179 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
USP11-212ENST00000497179 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 CTAGE5O15320 804 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
USP11-212ENST00000497179 ATP9AO75110 1047 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 GGPS1O95749 300 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 PGK1P00558 417 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 CST5P28325 142 aaPredicted RBP16.4■□□□□ 0.22
USP11-212ENST00000497179 NEDD9Q14511 834 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
USP11-212ENST00000497179 BRAPQ7Z569 592 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 GIMAP8Q8ND71 665 aaPredicted RBP16.4■□□□□ 0.22
USP11-212ENST00000497179 SPC25Q9HBM1 224 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
USP11-212ENST00000497179 NOL7Q9UMY1 257 aaKnown RBP16.4■□□□□ 0.22
USP11-212ENST00000497179 NFASCO94856 1347 aa16.4■□□□□ 0.22
USP11-212ENST00000497179 MYADML2A6NDP7 307 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 CCDC85CA6NKD9 419 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 WNT7AO00755 349 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 MSH4O15457 936 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 SLC37A4O43826 429 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 CCNT1O60563 726 aaKnown RBP16.39■□□□□ 0.21
USP11-212ENST00000497179 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
USP11-212ENST00000497179 RESTQ13127 1097 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 ITGB3BPQ13352 177 aaPredicted RBP16.39■□□□□ 0.21
USP11-212ENST00000497179 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
USP11-212ENST00000497179 LAMC2Q13753 1193 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 LRRC41Q15345 812 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 FSCN1Q16658 493 aaKnown RBP16.39■□□□□ 0.21
USP11-212ENST00000497179 MYSM1Q5VVJ2 828 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 METTL7BQ6UX53 244 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 RNF180Q86T96 592 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
USP11-212ENST00000497179 ANKLE1Q8NAG6 615 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 ARRDC4Q8NCT1 418 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 PKD2L1Q9P0L9 805 aa16.39■□□□□ 0.21
USP11-212ENST00000497179 A6NJR5 290 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 IPO5O00410 1097 aaKnown RBP16.38■□□□□ 0.21
USP11-212ENST00000497179 DNM1LO00429 736 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 FARP2O94887 1054 aaPredicted RBP16.38■□□□□ 0.21
USP11-212ENST00000497179 C6orf222P0C671 652 aaPredicted RBP16.38■□□□□ 0.21
USP11-212ENST00000497179 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
USP11-212ENST00000497179 CPT1AP50416 773 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 TOB1P50616 345 aaPredicted RBP16.38■□□□□ 0.21
USP11-212ENST00000497179 IRX5P78411 483 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms