RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 LMCD1Q9NZU5 365 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 OPLAHO14841 1288 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 EFCAB14O75071 495 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 HSD17B4P51659 736 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 ERVK-21P61565 698 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 MBTPS1Q14703 1052 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 IMMTQ16891 758 aaKnown RBP14.36□□□□□ -0.11
SAMM50-205ENST00000493621 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 UBAC1Q9BSL1 405 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 LRFN3Q9BTN0 628 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
SAMM50-205ENST00000493621 LGR5O75473 907 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 RGS20O76081 388 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 HIC1Q14526 733 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 MYSM1Q5VVJ2 828 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.35□□□□□ -0.117e-24■■■■■ 43.3
SAMM50-205ENST00000493621 PLEKHM2Q8IWE5 1019 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 SPATA33Q96N06 139 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 PDCD2LQ9BRP1 358 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 KRT23Q9C075 422 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 DOCK5Q9H7D0 1870 aa14.35□□□□□ -0.11
SAMM50-205ENST00000493621 BAZ2BQ9UIF8 2168 aaKnown RBP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 KLRF2D3W0D1 207 aa14.34□□□□□ -0.11
SAMM50-205ENST00000493621 PPP1R11O60927 126 aaPredicted RBP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 PPFIA4O75335 1185 aa14.34□□□□□ -0.11
SAMM50-205ENST00000493621 GGPS1O95749 300 aa14.34□□□□□ -0.11
SAMM50-205ENST00000493621 HOXD8P13378 290 aaPredicted RBP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 HSDL1Q3SXM5 330 aa14.34□□□□□ -0.11
SAMM50-205ENST00000493621 CELF3Q5SZQ8 465 aaKnown RBP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 KCNV1Q6PIU1 500 aa14.34□□□□□ -0.11
SAMM50-205ENST00000493621 SMC5Q8IY18 1101 aa14.34□□□□□ -0.11
SAMM50-205ENST00000493621 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
SAMM50-205ENST00000493621 PCDHA1Q9Y5I3 950 aa14.34□□□□□ -0.11
SAMM50-205ENST00000493621 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.11
SAMM50-205ENST00000493621 HIP1O00291 1037 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 ZBTB5O15062 677 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 AMHP03971 560 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 THPOP40225 353 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 SP2Q02086 613 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 GHRHRQ02643 423 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 PGM5Q15124 567 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 STOX1Q6ZVD7 989 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 CHD1LQ86WJ1 897 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 MYOCDQ8IZQ8 938 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 DBF4BQ8NFT6 615 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 IL31RAQ8NI17 732 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 C17orf80Q9BSJ5 609 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 OSBPL3Q9H4L5 887 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 UBE2ZQ9H832 354 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-205ENST00000493621 CNNM2Q9H8M5 875 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 MAP3K20Q9NYL2 800 aaKnown RBP14.33□□□□□ -0.12
SAMM50-205ENST00000493621 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 INSL6Q9Y581 213 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 EMSYQ7Z589 1322 aa14.33□□□□□ -0.12
SAMM50-205ENST00000493621 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 RSPH10B2B2RC85 870 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 RSPH10BP0C881 870 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 UBA1P22314 1058 aaKnown RBP14.32□□□□□ -0.12
SAMM50-205ENST00000493621 CCND2P30279 289 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 CYB5R4Q7L1T6 521 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 SERINC5Q86VE9 423 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 VSIG10LQ86VR7 867 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 HOMER1Q86YM7 354 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 GPKOWQ92917 476 aaPredicted RBP eCLIP14.32□□□□□ -0.12
SAMM50-205ENST00000493621 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 MTMR8Q96EF0 704 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 C16orf70Q9BSU1 422 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 RWDD1Q9H446 243 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-205ENST00000493621 MLXIPQ9HAP2 919 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 CD320Q9NPF0 282 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 MAD2L2Q9UI95 211 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 HCN4Q9Y3Q4 1203 aa14.32□□□□□ -0.12
SAMM50-205ENST00000493621 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.31□□□□□ -0.12
SAMM50-205ENST00000493621 FAM86C2PA6NEL3 165 aa14.31□□□□□ -0.12
SAMM50-205ENST00000493621 KCNA5P22460 613 aa14.31□□□□□ -0.12
SAMM50-205ENST00000493621 NUCB1Q02818 461 aa14.31□□□□□ -0.12
SAMM50-205ENST00000493621 MKRN4PQ13434 485 aaPredicted RBP14.31□□□□□ -0.12
SAMM50-205ENST00000493621 SEC23AQ15436 765 aa14.31□□□□□ -0.12
SAMM50-205ENST00000493621 FCHSD1Q86WN1 690 aa14.31□□□□□ -0.12
SAMM50-205ENST00000493621 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
SAMM50-205ENST00000493621 KAT6AQ92794 2004 aa14.31□□□□□ -0.12
SAMM50-205ENST00000493621 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
SAMM50-205ENST00000493621 H3BRB1 525 aa14.3□□□□□ -0.12
SAMM50-205ENST00000493621 GCOM1H8Y6P7 765 aaPredicted RBP14.3□□□□□ -0.12
SAMM50-205ENST00000493621 TREHO43280 583 aa14.3□□□□□ -0.12
SAMM50-205ENST00000493621 IGHDP01880 384 aa14.3□□□□□ -0.12
SAMM50-205ENST00000493621 POLR2MP0CAP2 368 aa14.3□□□□□ -0.12
SAMM50-205ENST00000493621 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
SAMM50-205ENST00000493621 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
SAMM50-205ENST00000493621 TGFB3P10600 412 aa14.3□□□□□ -0.12
SAMM50-205ENST00000493621 HTRA4P83105 476 aaPredicted RBP14.3□□□□□ -0.12
SAMM50-205ENST00000493621 SLC35G1Q2M3R5 365 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms