RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 KLHL30Q0D2K2 578 aa16.27■□□□□ 0.2
SMTN-219ENST00000493335 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
SMTN-219ENST00000493335 BRINP3Q76B58 766 aa16.27■□□□□ 0.2
SMTN-219ENST00000493335 NEK8Q86SG6 692 aa16.27■□□□□ 0.2
SMTN-219ENST00000493335 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.2
SMTN-219ENST00000493335 TSG101Q99816 390 aa16.27■□□□□ 0.2
SMTN-219ENST00000493335 BARHL2Q9NY43 387 aa16.27■□□□□ 0.2
SMTN-219ENST00000493335 MAD2L2Q9UI95 211 aa16.27■□□□□ 0.2
SMTN-219ENST00000493335 ORC4O43929 436 aa16.27■□□□□ 0.19
SMTN-219ENST00000493335 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.19
SMTN-219ENST00000493335 ERFEQ4G0M1 354 aa16.27■□□□□ 0.19
SMTN-219ENST00000493335 FAM83BQ5T0W9 1011 aa16.27■□□□□ 0.19
SMTN-219ENST00000493335 CENPPQ6IPU0 288 aa16.27■□□□□ 0.19
SMTN-219ENST00000493335 ADAT2Q7Z6V5 191 aaKnown RBP16.27■□□□□ 0.19
SMTN-219ENST00000493335 BAP1Q92560 729 aa16.27■□□□□ 0.19
SMTN-219ENST00000493335 LARP4BQ92615 738 aaKnown RBP16.27■□□□□ 0.19
SMTN-219ENST00000493335 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.19
SMTN-219ENST00000493335 A0A087X0T9 212 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 SMIM23A6NLE4 172 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 ECM2O94769 699 aaPredicted RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 FAM228BP0C875 321 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 EPB41P11171 864 aaKnown RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 PRLRP16471 622 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 CDK17Q00537 523 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 E2F5Q15329 346 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 DIXDC1Q155Q3 683 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 FIGNQ5HY92 759 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 CCDC13Q8IYE1 715 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 TGFBRAP1Q8WUH2 860 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 DDX12PQ92771 950 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 DDX47Q9H0S4 455 aaKnown RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 SEC63Q9UGP8 760 aaKnown RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 CHD4Q14839 1912 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 DISP2A7MBM2 1401 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 FGFR1OPO95684 399 aaKnown RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 CALCRLQ16602 461 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 KDM7AQ6ZMT4 941 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 MAPKAPK5Q8IW41 473 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 NUDT12Q9BQG2 462 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 LUC7LQ9NQ29 371 aaKnown RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
SMTN-219ENST00000493335 MINPP1Q9UNW1 487 aa16.26■□□□□ 0.19
SMTN-219ENST00000493335 RAD21O60216 631 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 TNNI2P48788 182 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 TNNC1P63316 161 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 MMTAG2Q9BU76 263 aaKnown RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 DPH5Q9H2P9 285 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 C6orf50Q9HD87 102 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 TDP2O95551 362 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 EIF6P56537 245 aaKnown RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 PIK3R5Q8WYR1 880 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 TMEM47Q9BQJ4 181 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 CUEDC2Q9H467 287 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 ATP8A2Q9NTI2 1148 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 COL1A1P02452 1464 aaPredicted RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 FRMD3A2A2Y4 597 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 GNAQP50148 359 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 KCNMA1Q12791 1236 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 PRPF4BQ13523 1007 aaKnown RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 RPS6KA1Q15418 735 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.25■□□□□ 0.19
SMTN-219ENST00000493335 RNF217Q8TC41 542 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 COA7Q96BR5 231 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 SGSM3Q96HU1 749 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 PIGSQ96S52 555 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 KLC4Q9NSK0 619 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 CCDC87Q9NVE4 849 aa16.25■□□□□ 0.19
SMTN-219ENST00000493335 NOVA2Q9UNW9 492 aaKnown RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 FRMPD2Q68DX3 1309 aaPredicted RBP16.25■□□□□ 0.19
SMTN-219ENST00000493335 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
SMTN-219ENST00000493335 TLR2O60603 784 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 HIBADHP31937 336 aaKnown RBP16.24■□□□□ 0.19
SMTN-219ENST00000493335 ITIH3Q06033 890 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 KCNK18Q7Z418 384 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 CYFIP2Q96F07 1278 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 AK8Q96MA6 479 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 SPAG5Q96R06 1193 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 GDF3Q9NR23 364 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMTN-219ENST00000493335 NTSR2O95665 410 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 ACTN1P12814 892 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 IFFO1Q0D2I5 559 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 GRB10Q13322 594 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 UBE4AQ14139 1066 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 GLE1Q53GS7 698 aaKnown RBP16.24■□□□□ 0.19
SMTN-219ENST00000493335 HGSNATQ68CP4 663 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 CPLX4Q7Z7G2 160 aa16.24■□□□□ 0.19
SMTN-219ENST00000493335 REXO1Q8N1G1 1221 aaKnown RBP16.24■□□□□ 0.19
SMTN-219ENST00000493335 HNRNPH3P31942 346 aaKnown RBP16.23■□□□□ 0.19
SMTN-219ENST00000493335 HSD17B3P37058 310 aa16.23■□□□□ 0.19
SMTN-219ENST00000493335 FNTAP49354 379 aa16.23■□□□□ 0.19
SMTN-219ENST00000493335 ERVK-9P63128 1117 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms