RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 SUPT20HL2P0C7V6 817 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 POLR2MP0CAP2 368 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 ATP2A2P16615 1042 aaKnown RBP10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 CASTP20810 708 aaKnown RBP10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 DEFB103AP81534 67 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 SP4Q02446 784 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 GHRHRQ02643 423 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 MBTPS1Q14703 1052 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 UBE2SQ16763 222 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 TRIM71Q2Q1W2 868 aaKnown RBP10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 BRDTQ58F21 947 aaPredicted RBP10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 CELF3Q5SZQ8 465 aaKnown RBP10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 PPP2R2DQ66LE6 453 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 CATIPQ7Z7H3 387 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 TRIM50Q86XT4 487 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 RPUSD2Q8IZ73 545 aaKnown RBP10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 RETREG2Q8NC44 543 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 SPATA33Q96N06 139 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 GTF2IRD1Q9UHL9 959 aa10.55□□□□□ -0.72
GTF3C5-210ENST00000489842 B4DLN1 442 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 KPNA6O60684 536 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 F2P00734 622 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 CKBP12277 381 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 CPA1P15085 419 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 CCND2P30279 289 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 MRPL12P52815 198 aaKnown RBP10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 NECTIN1Q15223 517 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 RAB30Q15771 203 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 DGKDQ16760 1214 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 ZNF618Q5T7W0 954 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 FAM117BQ6P1L5 589 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 NFXL1Q6ZNB6 911 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 LRRC8DQ7L1W4 858 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 CYFIP1Q7L576 1253 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 GAS2L1Q99501 681 aaPredicted RBP10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 SLC28A3Q9HAS3 691 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 ANO2Q9NQ90 1003 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 PKD2L1Q9P0L9 805 aa10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 TCF20Q9UGU0 1960 aaKnown RBP10.54□□□□□ -0.72
GTF3C5-210ENST00000489842 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 MEIS2O14770 477 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 ADAMTS3O15072 1205 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 NT5C2P49902 561 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 ADCK5Q3MIX3 580 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 UTP14CQ5TAP6 766 aaKnown RBP10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 C7orf31Q8N865 590 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 PPTC7Q8NI37 304 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 ARNTL2Q8WYA1 636 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 EMID1Q96A84 441 aaPredicted RBP10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 ZBTB10Q96DT7 871 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 PGBD1Q96JS3 809 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 C16orf70Q9BSU1 422 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 MTIF3Q9H2K0 278 aaKnown RBP10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 MLXIPQ9HAP2 919 aa10.53□□□□□ -0.72
GTF3C5-210ENST00000489842 CUL9Q8IWT3 2517 aa10.52□□□□□ -0.72
GTF3C5-210ENST00000489842 XIRP2A4UGR9 3374 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 TREHO43280 583 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 ATP9AO75110 1047 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 LGALS2P05162 132 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 CTSHP09668 335 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 SELPP16109 830 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 WDR5P61964 334 aaKnown RBP10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 TFF2Q03403 129 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 TAP1Q03518 808 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 BFSP2Q13515 415 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 SART3Q15020 963 aaKnown RBP10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 CASC1Q6TDU7 716 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 SESTD1Q86VW0 696 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 MICU3Q86XE3 530 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 HERC6Q8IVU3 1022 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 CTCFLQ8NI51 663 aaPredicted RBP10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 UIMC1Q96RL1 719 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 SEZ6LQ9BYH1 1024 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 MTUS1Q9ULD2 1270 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 BRPF3Q9ULD4 1205 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 PCDHA11Q9Y5I1 949 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 FRMPD4Q14CM0 1322 aa10.52□□□□□ -0.73
GTF3C5-210ENST00000489842 SIP14410 1827 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 CCDC69A6NI79 296 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 PPFIA3O75145 1194 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 DDAH1O94760 285 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 SMIM10L2AP0DMW4 78 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 SMIM10L2BP0DMW5 78 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 HOXD8P13378 290 aaPredicted RBP10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 MCM5P33992 734 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 THPOP40225 353 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
GTF3C5-210ENST00000489842 RRP36Q96EU6 259 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms