RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 RSPO2Q6UXX9 243 aaPredicted RBP5.3□□□□□ -1.56
NF1-213ENST00000489712 LRRC47Q8N1G4 583 aaKnown RBP5.3□□□□□ -1.56
NF1-213ENST00000489712 FAM26EQ8N5C1 309 aa5.3□□□□□ -1.56
NF1-213ENST00000489712 TTLL6Q8N841 843 aa5.3□□□□□ -1.56
NF1-213ENST00000489712 KYQ8NBH2 561 aa5.3□□□□□ -1.56
NF1-213ENST00000489712 C11orf84Q9BUA3 381 aaPredicted RBP5.3□□□□□ -1.56
NF1-213ENST00000489712 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
NF1-213ENST00000489712 ARHGEF4Q9NR80 690 aa5.3□□□□□ -1.56
NF1-213ENST00000489712 DLX3O60479 287 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 FGFR1P11362 822 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 ITGA1P56199 1179 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 NKX3-2P78367 333 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 PHOSPHO1Q8TCT1 267 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 PHF20Q9BVI0 1012 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 SPATA6Q9NWH7 488 aaPredicted RBP5.29□□□□□ -1.56
NF1-213ENST00000489712 DTLQ9NZJ0 730 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 MYOTQ9UBF9 498 aa5.29□□□□□ -1.56
NF1-213ENST00000489712 TCRBV5S2A0A599 114 aa5.28□□□□□ -1.56
NF1-213ENST00000489712 KRIT1O00522 736 aa5.28□□□□□ -1.56
NF1-213ENST00000489712 PRODHO43272 600 aa5.28□□□□□ -1.56
NF1-213ENST00000489712 CELA3BP08861 270 aa5.28□□□□□ -1.56
NF1-213ENST00000489712 RPL13P26373 211 aaKnown RBP5.28□□□□□ -1.56
NF1-213ENST00000489712 BUD31P41223 144 aaPredicted RBP5.28□□□□□ -1.56
NF1-213ENST00000489712 KIZQ2M2Z5 673 aa5.28□□□□□ -1.56
NF1-213ENST00000489712 CYP4F22Q6NT55 531 aa5.28□□□□□ -1.56
NF1-213ENST00000489712 ADAMTS17Q8TE56 1095 aa5.28□□□□□ -1.56
NF1-213ENST00000489712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.28□□□□□ -1.56
NF1-213ENST00000489712 ZNF669Q96BR6 464 aaPredicted RBP5.28□□□□□ -1.56
NF1-213ENST00000489712 TRAV20A0A0B4J274 112 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 PABPC1P11940 636 aaKnown RBP5.27□□□□□ -1.57
NF1-213ENST00000489712 GRK2P25098 689 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 GRK3P35626 688 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 IFRD2Q12894 506 aaPredicted RBP5.27□□□□□ -1.57
NF1-213ENST00000489712 NBPF6Q5VWK0 638 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 NSMFQ6X4W1 530 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 DPH6Q7L8W6 267 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 ZNF761Q86XN6 746 aaPredicted RBP5.27□□□□□ -1.57
NF1-213ENST00000489712 ARRDC4Q8NCT1 418 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 DCAF4Q8WV16 495 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 TOE1Q96GM8 510 aaKnown RBP5.27□□□□□ -1.57
NF1-213ENST00000489712 NBPF4Q96M43 638 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 WRNIP1Q96S55 665 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 ZFYVE21Q9BQ24 234 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 BDH2Q9BUT1 245 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 TANGO6Q9C0B7 1094 aa5.27□□□□□ -1.57
NF1-213ENST00000489712 PPP1R1BQ9UD71 204 aaPredicted RBP5.27□□□□□ -1.57
NF1-213ENST00000489712 NOBOXO60393 691 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 MSCO60682 206 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 TADA3O75528 432 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 GPR85P60893 370 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 RTP5Q14D33 572 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 CR1LQ2VPA4 569 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 MTERF2Q49AM1 385 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 FAM26FQ5R3K3 315 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 UBXN11Q5T124 520 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 ZFYVE27Q5T4F4 411 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 PIP4K2CQ8TBX8 421 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 OSBP2Q969R2 916 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 C8orf37Q96NL8 207 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 TMEM209Q96SK2 561 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 SYT3Q9BQG1 590 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 LNPKQ9C0E8 428 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 CDIP1Q9H305 208 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 SMOC1Q9H4F8 434 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 MSRB2Q9Y3D2 182 aa5.26□□□□□ -1.57
NF1-213ENST00000489712 PDPK1O15530 556 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 PRICKLE3O43900 615 aaPredicted RBP5.25□□□□□ -1.57
NF1-213ENST00000489712 ATP2B1P20020 1258 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 CNR2P34972 360 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 RASGRF1Q13972 1273 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 SKOR2Q2VWA4 1001 aaPredicted RBP5.25□□□□□ -1.57
NF1-213ENST00000489712 STYK1Q6J9G0 422 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 TEPPQ6URK8 271 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 LBX2Q6XYB7 198 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 STK32CQ86UX6 486 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 TRIM48Q8IWZ4 208 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 TTLL11Q8NHH1 800 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.25□□□□□ -1.57
NF1-213ENST00000489712 CLIC6Q96NY7 704 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 SLC6A20Q9NP91 592 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 PPARGC1AQ9UBK2 798 aaKnown RBP5.25□□□□□ -1.57
NF1-213ENST00000489712 ASH2LQ9UBL3 628 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 NUB1Q9Y5A7 615 aa5.25□□□□□ -1.57
NF1-213ENST00000489712 CYP7B1O75881 506 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 GNAT1P11488 350 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 PLP2Q04941 152 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 SPIRE1Q08AE8 756 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 ADAM9Q13443 819 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 NTRK3Q16288 839 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 RGL3Q3MIN7 710 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 PRR31Q5SQ13 230 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 YOD1Q5VVQ6 348 aaPredicted RBP5.24□□□□□ -1.57
NF1-213ENST00000489712 KCNT2Q6UVM3 1135 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 OTOP3Q7RTS5 596 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 FAM124AQ86V42 546 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 ZSWIM3Q96MP5 696 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 ALG1Q9BT22 464 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 SPATA9Q9BWV2 254 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 JAM3Q9BX67 310 aa5.24□□□□□ -1.57
NF1-213ENST00000489712 ADAMTS20P59510 1910 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms