RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 SENP7Q9BQF6 1050 aa22.04■■□□□ 1.12
PCOLCE-208ENST00000487172 FAM205CA6NFA0 338 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 STX6O43752 255 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 ARIH2O95376 493 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 SGPL1O95470 568 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 NKX3-2P78367 333 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 SETQ01105 290 aaPredicted RBP22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 SEMA3FQ13275 785 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 MTMR1Q13613 665 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 SPRYD3Q8NCJ5 442 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 DEFB118Q96PH6 123 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 CRISPLD2Q9H0B8 497 aa22.03■■□□□ 1.12
PCOLCE-208ENST00000487172 GCFC2P16383 781 aaKnown RBP22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 GJA8P48165 433 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 Q4G0T1 1027 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 TMEM63BQ5T3F8 832 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 MCTP1Q6DN14 999 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 PLA2G4DQ86XP0 818 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 U2AF1L4Q8WU68 220 aaKnown RBP22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 TSHZ2Q9NRE2 1034 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 KCNH7Q9NS40 1196 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 OGDHLQ9ULD0 1010 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 MTMR6Q9Y217 621 aa22.02■■□□□ 1.12
PCOLCE-208ENST00000487172 VPS37CA5D8V6 355 aaPredicted RBP22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 TRAPPC10P48553 1259 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 GJA9P57773 515 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 NEDD9Q14511 834 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 LY6KQ17RY6 165 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 LETM2Q2VYF4 491 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 ANO1Q5XXA6 986 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 GIMAP8Q8ND71 665 aaPredicted RBP22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 LENG9Q96B70 501 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 UPF3AQ9H1J1 476 aaKnown RBP22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 FRMPD3Q5JV73 1810 aa22.01■■□□□ 1.11
PCOLCE-208ENST00000487172 ADAMTS4O75173 837 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 GH1P01241 217 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 ARP10275 920 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 KCNA2P16389 499 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 SP2Q02086 613 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 PRR16Q569H4 304 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 BRAPQ7Z569 592 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 EMID1Q96A84 441 aaPredicted RBP22■■□□□ 1.11
PCOLCE-208ENST00000487172 AGO4Q9HCK5 861 aaKnown RBP22■■□□□ 1.11
PCOLCE-208ENST00000487172 XPNPEP3Q9NQH7 507 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 RBM19Q9Y4C8 960 aaKnown RBP22■■□□□ 1.11
PCOLCE-208ENST00000487172 HTTP42858 3142 aa22■■□□□ 1.11
PCOLCE-208ENST00000487172 CCNT1O60563 726 aaKnown RBP21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 ATP9AO75110 1047 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 TDP2O95551 362 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 UBA1P22314 1058 aaKnown RBP21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 ORC2Q13416 577 aaPredicted RBP21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 LAMC2Q13753 1193 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 CELF3Q5SZQ8 465 aaKnown RBP21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 MYSM1Q5VVJ2 828 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 TLK2Q86UE8 772 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 KLHDC9Q8NEP7 349 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 LENG1Q96BZ8 264 aaPredicted RBP21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 AP5M1Q9H0R1 490 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 SPC25Q9HBM1 224 aa21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 DDX25Q9UHL0 483 aaKnown RBP21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 NOL7Q9UMY1 257 aaKnown RBP21.99■■□□□ 1.11
PCOLCE-208ENST00000487172 POTEFA5A3E0 1075 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 DYNC1LI2O43237 492 aaPredicted RBP21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 CST5P28325 142 aaPredicted RBP21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 ARHGAP1Q07960 439 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 GJC2Q5T442 439 aaPredicted RBP21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 ANKLE1Q8NAG6 615 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 ARRDC4Q8NCT1 418 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 OR6J1Q8NGC5 347 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 COPS5Q92905 334 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 ZSCAN16Q9H4T2 348 aaPredicted RBP21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 NFASCO94856 1347 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 SYNRGQ9UMZ2 1314 aa21.98■■□□□ 1.11
PCOLCE-208ENST00000487172 GGPS1O95749 300 aa21.97■■□□□ 1.11
PCOLCE-208ENST00000487172 RILPL1Q5EBL4 403 aa21.97■■□□□ 1.11
PCOLCE-208ENST00000487172 METTL7BQ6UX53 244 aa21.97■■□□□ 1.11
PCOLCE-208ENST00000487172 RNF180Q86T96 592 aa21.97■■□□□ 1.11
PCOLCE-208ENST00000487172 DHX37Q8IY37 1157 aaKnown RBP21.97■■□□□ 1.11
PCOLCE-208ENST00000487172 A6NJR5 290 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 IPO5O00410 1097 aaKnown RBP21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 TBX3O15119 743 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 CTAGE5O15320 804 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 MSH4O15457 936 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 FARP2O94887 1054 aaPredicted RBP21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 PGK1P00558 417 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 TFRCP02786 760 aaKnown RBP21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 TOB1P50616 345 aaPredicted RBP21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 RESTQ13127 1097 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 ZNF577Q9BSK1 485 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 MLXIPQ9HAP2 919 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 KCNMB3Q9NPA1 279 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 TBC1D22BQ9NU19 505 aa21.96■■□□□ 1.11
PCOLCE-208ENST00000487172 WNT7AO00755 349 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 DHX15O43143 795 aaKnown RBP21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 SLC37A4O43826 429 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 PTGS1P23219 599 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 CPT1AP50416 773 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 ITGB3BPQ13352 177 aaPredicted RBP21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 LRRC41Q15345 812 aa21.95■■□□□ 1.1
PCOLCE-208ENST00000487172 TTC38Q5R3I4 469 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms