RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 XPNPEP3Q9NQH7 507 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 TCEAL9Q9UHQ7 104 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 UBIAD1Q9Y5Z9 338 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.93□□□□□ -0.34
NUP50-216ENST00000486184 RBM47A0AV96 593 aaKnown RBP12.93□□□□□ -0.34
NUP50-216ENST00000486184 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 MAFGO15525 162 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 MARCH6O60337 910 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 DUSP11O75319 330 aaKnown RBP12.93□□□□□ -0.34
NUP50-216ENST00000486184 TGFB3P10600 412 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
NUP50-216ENST00000486184 SMPD1P17405 629 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 ITGB5P18084 799 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 ATP2B1P20020 1258 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
NUP50-216ENST00000486184 NEDD9Q14511 834 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 DUSP28Q4G0W2 176 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 BRDTQ58F21 947 aaPredicted RBP12.93□□□□□ -0.34
NUP50-216ENST00000486184 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 MOXD1Q6UVY6 613 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 NIPA1Q7RTP0 329 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 TLK2Q86UE8 772 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
NUP50-216ENST00000486184 PAK6Q9NQU5 681 aaPredicted RBP12.93□□□□□ -0.34
NUP50-216ENST00000486184 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 PKD2L1Q9P0L9 805 aa12.93□□□□□ -0.34
NUP50-216ENST00000486184 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 KIF28PB7ZC32 967 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 FAM86B1E9PN63 330 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 RGS20O76081 388 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 GH1P01241 217 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 TFRCP02786 760 aaKnown RBP12.92□□□□□ -0.34
NUP50-216ENST00000486184 GJB1P08034 283 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 FAM86B2P0C5J1 330 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 ICAM3P32942 547 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 CIITAP33076 1130 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
NUP50-216ENST00000486184 LY6KQ17RY6 165 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 EARS2Q5JPH6 523 aaKnown RBP12.92□□□□□ -0.34
NUP50-216ENST00000486184 FERMT3Q86UX7 667 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 DHX37Q8IY37 1157 aaKnown RBP12.92□□□□□ -0.34
NUP50-216ENST00000486184 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 CRYGNQ8WXF5 182 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 LENG1Q96BZ8 264 aaPredicted RBP12.92□□□□□ -0.34
NUP50-216ENST00000486184 SDF4Q9BRK5 362 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 ZNF577Q9BSK1 485 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 MLXIPQ9HAP2 919 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
NUP50-216ENST00000486184 DDX41Q9UJV9 622 aaKnown RBP12.92□□□□□ -0.34
NUP50-216ENST00000486184 Q9Y3F1 56 aa12.92□□□□□ -0.34
NUP50-216ENST00000486184 RBM19Q9Y4C8 960 aaKnown RBP12.92□□□□□ -0.34
NUP50-216ENST00000486184 CCDC85CA6NKD9 419 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 MEIS1O00470 390 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 DYNC1LI2O43237 492 aaPredicted RBP12.91□□□□□ -0.34
NUP50-216ENST00000486184 ZEB2O60315 1214 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 ARIH2O95376 493 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
NUP50-216ENST00000486184 SGPL1O95470 568 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 TDP2O95551 362 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 GGPS1O95749 300 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 C6orf222P0C671 652 aaPredicted RBP12.91□□□□□ -0.34
NUP50-216ENST00000486184 CAPN2P17655 700 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 UBA1P22314 1058 aaKnown RBP12.91□□□□□ -0.34
NUP50-216ENST00000486184 TRAPPC10P48553 1259 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 Q4G0T1 1027 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 RILPL1Q5EBL4 403 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 TTC38Q5R3I4 469 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 PPP4R3AQ6IN85 833 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 RNF180Q86T96 592 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 ARRDC4Q8NCT1 418 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 CYP2W1Q8TAV3 490 aa12.91□□□□□ -0.34
NUP50-216ENST00000486184 U2AF1L4Q8WU68 220 aaKnown RBP12.91□□□□□ -0.34
NUP50-216ENST00000486184 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
NUP50-216ENST00000486184 SYNRGQ9UMZ2 1314 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 WDR81Q562E7 1941 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 IGLV3-22A0A075B6J6 115 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 CYP3A7-CYP3A51PA0A087WV96 503 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 KBTBD13C9JR72 458 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 NOP56O00567 594 aaKnown RBP12.9□□□□□ -0.34
NUP50-216ENST00000486184 ADCY6O43306 1168 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 SORBS3O60504 671 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 PGK1P00558 417 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 ARP10275 920 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 CYP3A7P24462 503 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 MCM7P33993 719 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 GJA8P48165 433 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 CPT1AP50416 773 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
NUP50-216ENST00000486184 LAMC2Q13753 1193 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
NUP50-216ENST00000486184 CCDC62Q6P9F0 684 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 COPS5Q92905 334 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 SENP7Q9BQF6 1050 aa12.9□□□□□ -0.34
NUP50-216ENST00000486184 AGO4Q9HCK5 861 aaKnown RBP12.9□□□□□ -0.34
NUP50-216ENST00000486184 MTMR6Q9Y217 621 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms