RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 MEIS1O00470 390 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 PGK1P00558 417 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 MNX1P50219 401 aaPredicted RBP22.48■■□□□ 1.19
LIME1-205ENST00000480139 FOSBP53539 338 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 SEMA3FQ13275 785 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 MTMR1Q13613 665 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 LRRC41Q15345 812 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 LY6KQ17RY6 165 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 UBE2Q1Q7Z7E8 422 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 SENP7Q9BQF6 1050 aa22.48■■□□□ 1.19
LIME1-205ENST00000480139 IGLV3-22A0A075B6J6 115 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 BTBD18B2RXH4 712 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 FAM86B1E9PN63 330 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 CTAGE5O15320 804 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 GH1P01241 217 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 FAM86B2P0C5J1 330 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 UBA1P22314 1058 aaKnown RBP22.47■■□□□ 1.19
LIME1-205ENST00000480139 ZNF76P36508 570 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 NR5A1Q13285 461 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 GJC2Q5T442 439 aaPredicted RBP22.47■■□□□ 1.19
LIME1-205ENST00000480139 MOXD1Q6UVY6 613 aa22.47■■□□□ 1.19
LIME1-205ENST00000480139 TSEN34Q9BSV6 310 aaKnown RBP22.47■■□□□ 1.19
LIME1-205ENST00000480139 FOXP1Q9H334 677 aaPredicted RBP22.47■■□□□ 1.19
LIME1-205ENST00000480139 CYP3A7-CYP3A51PA0A087WV96 503 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 KBTBD13C9JR72 458 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 DYNC1LI2O43237 492 aaPredicted RBP22.46■■□□□ 1.19
LIME1-205ENST00000480139 EDIL3O43854 480 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 FARP2O94887 1054 aaPredicted RBP22.46■■□□□ 1.19
LIME1-205ENST00000480139 C6orf222P0C671 652 aaPredicted RBP22.46■■□□□ 1.19
LIME1-205ENST00000480139 CYP3A7P24462 503 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 SETQ01105 290 aaPredicted RBP22.46■■□□□ 1.19
LIME1-205ENST00000480139 SP2Q02086 613 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 GUCY1B3Q02153 619 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 ARHGAP1Q07960 439 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 NEDD9Q14511 834 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 CCSAPQ6IQ19 270 aaPredicted RBP22.46■■□□□ 1.19
LIME1-205ENST00000480139 PIK3AP1Q6ZUJ8 805 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 PCSK9Q8NBP7 692 aaKnown RBP22.46■■□□□ 1.19
LIME1-205ENST00000480139 GIMAP8Q8ND71 665 aaPredicted RBP22.46■■□□□ 1.19
LIME1-205ENST00000480139 OR6J1Q8NGC5 347 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 KCNH7Q9NS40 1196 aa22.46■■□□□ 1.19
LIME1-205ENST00000480139 MOXD2PA6NHM9 499 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 A6NJR5 290 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 PDCP20941 246 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 CPT1AP50416 773 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 LAMC2Q13753 1193 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 FSCN1Q16658 493 aaKnown RBP22.45■■□□□ 1.18
LIME1-205ENST00000480139 INF2Q27J81 1249 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 CELF3Q5SZQ8 465 aaKnown RBP22.45■■□□□ 1.18
LIME1-205ENST00000480139 CYP2W1Q8TAV3 490 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 COPS5Q92905 334 aa22.45■■□□□ 1.18
LIME1-205ENST00000480139 NAP1L4Q99733 375 aaKnown RBP22.45■■□□□ 1.18
LIME1-205ENST00000480139 MYADML2A6NDP7 307 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 GGPS1O95749 300 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 COL6A1P12109 1028 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 KCNA2P16389 499 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 PTGS1P23219 599 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 U2AF2P26368 475 aaKnown RBP eCLIP22.44■■□□□ 1.181e-9■■■■□ 23
LIME1-205ENST00000480139 BRDTQ58F21 947 aaPredicted RBP22.44■■□□□ 1.18
LIME1-205ENST00000480139 EARS2Q5JPH6 523 aaKnown RBP22.44■■□□□ 1.18
LIME1-205ENST00000480139 MYSM1Q5VVJ2 828 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 METTL7BQ6UX53 244 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 NEK8Q86SG6 692 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 DHX37Q8IY37 1157 aaKnown RBP22.44■■□□□ 1.18
LIME1-205ENST00000480139 MBOAT7Q96N66 472 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 DOCK5Q9H7D0 1870 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 PHF24Q9UPV7 400 aa22.44■■□□□ 1.18
LIME1-205ENST00000480139 ZEB2O60315 1214 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 GCFC2P16383 781 aaKnown RBP22.43■■□□□ 1.18
LIME1-205ENST00000480139 RGS19P49795 217 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 Q4G0T1 1027 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 GNASQ5JWF2 1037 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 LARP1BQ659C4 914 aaKnown RBP22.43■■□□□ 1.18
LIME1-205ENST00000480139 PPP4R3AQ6IN85 833 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 NECAB2Q7Z6G3 386 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 PLA2G4DQ86XP0 818 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 PPTC7Q8NI37 304 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 LENG9Q96B70 501 aa22.43■■□□□ 1.18
LIME1-205ENST00000480139 NFASCO94856 1347 aa22.42■■□□□ 1.18
LIME1-205ENST00000480139 H3BQV1 296 aa22.42■■□□□ 1.18
LIME1-205ENST00000480139 ATP9AO75110 1047 aa22.42■■□□□ 1.18
LIME1-205ENST00000480139 ARP10275 920 aa22.42■■□□□ 1.18
LIME1-205ENST00000480139 KCNA10Q16322 511 aa22.42■■□□□ 1.18
LIME1-205ENST00000480139 IFFO2Q5TF58 517 aa22.42■■□□□ 1.18
LIME1-205ENST00000480139 NOSTRINQ8IVI9 506 aa22.42■■□□□ 1.18
LIME1-205ENST00000480139 DIS3LQ8TF46 1054 aaKnown RBP22.42■■□□□ 1.18
LIME1-205ENST00000480139 PAWRQ96IZ0 340 aaKnown RBP22.42■■□□□ 1.18
LIME1-205ENST00000480139 AGO4Q9HCK5 861 aaKnown RBP22.42■■□□□ 1.18
LIME1-205ENST00000480139 FAM205CA6NFA0 338 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 KPNA6O60684 536 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 MYCNP04198 464 aaPredicted RBP22.41■■□□□ 1.18
LIME1-205ENST00000480139 HOXD8P13378 290 aaPredicted RBP22.41■■□□□ 1.18
LIME1-205ENST00000480139 ACLYP53396 1101 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 IRX5P78411 483 aaPredicted RBP22.41■■□□□ 1.18
LIME1-205ENST00000480139 BEX3Q00994 111 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 GNL2Q13823 731 aaKnown RBP22.41■■□□□ 1.18
LIME1-205ENST00000480139 LETM2Q2VYF4 491 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 PRR16Q569H4 304 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 C11orf49Q9H6J7 331 aa22.41■■□□□ 1.18
LIME1-205ENST00000480139 MLXIPQ9HAP2 919 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms