RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PARP1P09874 1014 aaKnown RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 TNFAIP3P21580 790 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 AKAP5P24588 427 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 BRD2P25440 801 aaKnown RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 MSH2P43246 934 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 RXRGP48443 463 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 PEX6Q13608 980 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 FAM45BPQ6NSW5 357 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 PROCA1Q8NCQ7 364 aaPredicted RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 TCP11Q8WWU5 503 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 EIF4E1BA6NMX2 242 aaKnown RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 MAP4P27816 1152 aaKnown RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 METAP2P50579 478 aaKnown RBP eCLIP5.84□□□□□ -1.47
USF3-202ENST00000478658 GNG11P61952 73 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 TRIP10Q15642 601 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 MTERF2Q49AM1 385 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 STAG1Q8WVM7 1258 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 STOML1Q9UBI4 398 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 UBA2Q9UBT2 640 aaPredicted RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 ARMCX3Q9UH62 379 aaPredicted RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 PCDHGB4Q9UN71 923 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 EFCAB5A4FU69 1503 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 MINDY4BA8MYZ0 360 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 ASAP2O43150 1006 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 KRT19P08727 400 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 ART3Q13508 389 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 SPARCL1Q14515 664 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 ALG11Q2TAA5 492 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 C2CD6Q53TS8 623 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 SYCP2LQ5T4T6 812 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 CHMP1BQ7LBR1 199 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 RHPN2Q8IUC4 686 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 MLPHQ9BV36 600 aaPredicted RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 PDZRN3Q9UPQ7 1066 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 ARHGAP5Q13017 1502 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 DAB1O75553 588 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 GNAT1P11488 350 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 S100A1P23297 94 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 UBASH3AP57075 661 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 UBXN1Q04323 297 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 GALNT3Q14435 633 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 CHRNA2Q15822 529 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 TRPM8Q7Z2W7 1104 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 NLRX1Q86UT6 975 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 ASAP3Q8TDY4 903 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 EFHD2Q96C19 240 aaPredicted RBP5.84□□□□□ -1.47
USF3-202ENST00000478658 PGBD1Q96JS3 809 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 OSBPL6Q9BZF3 934 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 KLC2Q9H0B6 622 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 ING2Q9H160 280 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 ZSWIM6Q9HCJ5 1215 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 TMEM51Q9NW97 253 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 SEL1LQ9UBV2 794 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 RSPH14Q9UHP6 348 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 FAM50BQ9Y247 325 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 RIPOR2Q9Y4F9 1068 aa5.84□□□□□ -1.47
USF3-202ENST00000478658 TNPO2O14787 897 aaKnown RBP5.84□□□□□ -1.48
USF3-202ENST00000478658 RFC4P35249 363 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 UBE2HP62256 183 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 GUCY1A3Q02108 690 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 RCN1Q15293 331 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 TBC1D25Q3MII6 688 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 TMEM67Q5HYA8 995 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 HABP4Q5JVS0 413 aaKnown RBP5.84□□□□□ -1.48
USF3-202ENST00000478658 B3GALT6Q96L58 329 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 NSMCE4AQ9NXX6 385 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 ABCC11Q96J66 1382 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 TRIM13O60858 407 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 CAPN1P07384 714 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 IL1RL1Q01638 556 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 RAD51Q06609 339 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 CSTF3Q12996 717 aaKnown RBP5.84□□□□□ -1.48
USF3-202ENST00000478658 GRM1Q13255 1194 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 FAM160B1Q5W0V3 765 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 IYDQ6PHW0 289 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 DPH6Q7L8W6 267 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 FGD2Q7Z6J4 655 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 NOP9Q86U38 636 aaKnown RBP5.84□□□□□ -1.48
USF3-202ENST00000478658 FAM45AQ8TCE6 357 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 NGLY1Q96IV0 654 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 EML4Q9HC35 981 aaKnown RBP5.84□□□□□ -1.48
USF3-202ENST00000478658 PSD3Q9NYI0 1048 aa5.84□□□□□ -1.48
USF3-202ENST00000478658 BTBD11A6QL63 1104 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 NFKB1P19838 968 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 KRT9P35527 623 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 MLH1P40692 756 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SYKP43405 635 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 RARSP54136 660 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 C6orf10Q5SRN2 563 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 DEPDC1Q5TB30 811 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 PMF1Q6P1K2 205 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 RASSF6Q6ZTQ3 369 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SESTD1Q86VW0 696 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ZNF280CQ8ND82 737 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 FAM212AQ96EL1 285 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 GCOM2Q9BZD3 368 aaPredicted RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 NRDE2Q9H7Z3 1164 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 TRPC4Q9UBN4 977 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 TUBGCP4Q9UGJ1 667 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 TRPC5Q9UL62 973 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms