RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 SMCR8Q8TEV9 937 aaPredicted RBP12.13□□□□□ -0.47
SP140-208ENST00000473711 LENG9Q96B70 501 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 R3HDMLQ9H3Y0 253 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 TTC12Q9H892 705 aaPredicted RBP12.13□□□□□ -0.47
SP140-208ENST00000473711 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 PXMP2Q9NR77 195 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 CYP39A1Q9NYL5 469 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 ABT1Q9ULW3 272 aaKnown RBP12.13□□□□□ -0.47
SP140-208ENST00000473711 TLL2Q9Y6L7 1015 aa12.13□□□□□ -0.47
SP140-208ENST00000473711 COL11A1P12107 1806 aaPredicted RBP12.13□□□□□ -0.47
SP140-208ENST00000473711 MYH7BA7E2Y1 1941 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 A0A087X0B3 334 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
SP140-208ENST00000473711 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 CTAGE5O15320 804 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 MSH4O15457 936 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 TOMM70O94826 608 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 SLC25A27O95847 323 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 TXLNAP40222 546 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 UBA7P41226 1012 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 ERVK-24P63145 666 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 PGM5Q15124 567 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 CEP55Q53EZ4 464 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 KRBA2Q6ZNG9 492 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 SLFN12Q8IYM2 578 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
SP140-208ENST00000473711 DHX58Q96C10 678 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 AK8Q96MA6 479 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 MAF1Q9H063 256 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 PCDHA12Q9UN75 941 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
SP140-208ENST00000473711 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
SP140-208ENST00000473711 MEIS1O00470 390 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 TBX3O15119 743 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 SLC10A3P09131 477 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 ARP10275 920 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
SP140-208ENST00000473711 PDIA5Q14554 519 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 KARSQ15046 597 aaKnown RBP12.11□□□□□ -0.47
SP140-208ENST00000473711 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
SP140-208ENST00000473711 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 PCNX4Q63HM2 1172 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 CABP7Q86V35 215 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 ANKRD13CQ8N6S4 541 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 DNAJC5GQ8N7S2 189 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 IGSF22Q8N9C0 903 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 GPRC5AQ8NFJ5 357 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 ETNPPLQ8TBG4 499 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 NSUN6Q8TEA1 469 aaKnown RBP12.11□□□□□ -0.47
SP140-208ENST00000473711 ERCC4Q92889 916 aaPredicted RBP12.11□□□□□ -0.47
SP140-208ENST00000473711 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 PLIN2Q99541 437 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 PDCD2LQ9BRP1 358 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 RAB34Q9BZG1 259 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 CCSER1Q9C0I3 900 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 LRWD1Q9UFC0 647 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 UBIAD1Q9Y5Z9 338 aa12.11□□□□□ -0.47
SP140-208ENST00000473711 FAM155AB1AL88 458 aaPredicted RBP12.1□□□□□ -0.47
SP140-208ENST00000473711 FOXN1O15353 648 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
SP140-208ENST00000473711 NR3C2P08235 984 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 ITGB5P18084 799 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 COPB2P35606 906 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 GCLCP48506 637 aaPredicted RBP12.1□□□□□ -0.47
SP140-208ENST00000473711 CNTN2Q02246 1040 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 RRAGBQ5VZM2 374 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 RBM43Q6ZSC3 357 aaKnown RBP12.1□□□□□ -0.47
SP140-208ENST00000473711 IQUBQ8NA54 791 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 PARK7Q99497 189 aaKnown RBP12.1□□□□□ -0.47
SP140-208ENST00000473711 WDR11Q9BZH6 1224 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 TSPY26PQ9H489 355 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 PFASO15067 1338 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 FRMPD4Q14CM0 1322 aa12.1□□□□□ -0.47
SP140-208ENST00000473711 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 IGF2BP3O00425 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
SP140-208ENST00000473711 PPP1R37O75864 691 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 SLFN14P0C7P3 912 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 CCND2P30279 289 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 AFMP43652 599 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 CCNA1P78396 465 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 GRM1Q13255 1194 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 E2F4Q16254 413 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 KANK3Q6NY19 840 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 XRRA1Q6P2D8 792 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
SP140-208ENST00000473711 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms