RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TMEM60Q9H2L4 133 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 IQSEC3Q9UPP2 1182 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-207ENST00000470763 FAM205AQ6ZU69 1335 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 CNTNAP5Q8WYK1 1306 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 RTN2O75298 545 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 UQCRFS1P1P0C7P4 283 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 HNRNPH3P31942 346 aaKnown RBP15.15■□□□□ 0.02
NPHP4-207ENST00000470763 CCNHP51946 323 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-207ENST00000470763 ASIC1P78348 528 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 PPP1R7Q15435 360 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 ENOX2Q16206 610 aaKnown RBP15.15■□□□□ 0.02
NPHP4-207ENST00000470763 FAM114A1Q8IWE2 563 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 ZSCAN29Q8IWY8 852 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-207ENST00000470763 PROM2Q8N271 834 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 C4orf32Q8N8J7 132 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 STAMBPL1Q96FJ0 436 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 NOD2Q9HC29 1040 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 NLRC4Q9NPP4 1024 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 SIK3Q9Y2K2 1263 aa15.15■□□□□ 0.02
NPHP4-207ENST00000470763 TROAPQ12815 778 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 MYO1EQ12965 1108 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 XRCC4Q13426 336 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 HLFQ16534 295 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 DTHD1Q6ZMT9 781 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 TMTC3Q6ZXV5 915 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 PLCB1Q9NQ66 1216 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 BICDL2A1A5D9 508 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 LCA5LO95447 670 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 ATP6V1G2O95670 118 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 CDC25CP30307 473 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 ELF3P78545 371 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-207ENST00000470763 ZBTB38Q8NAP3 1195 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-207ENST00000470763 TBC1D22AQ8WUA7 517 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 NDST4Q9H3R1 872 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 TAF1DQ9H5J8 278 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-207ENST00000470763 LRRC4CQ9HCJ2 640 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 RGPD3A6NKT7 1758 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-207ENST00000470763 RGPD4Q7Z3J3 1758 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 H0YGN5 161 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 NMT2O60551 498 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 BUB1BO60566 1050 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-207ENST00000470763 FLT3P36888 993 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 PPP2R2AP63151 447 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 GKAP1Q5VSY0 366 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-207ENST00000470763 CACNA2D4Q7Z3S7 1137 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 MDM1Q8TC05 714 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 GPKOWQ92917 476 aaPredicted RBP eCLIP15.14■□□□□ 0.01
NPHP4-207ENST00000470763 ACSBG1Q96GR2 724 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 NEUROG2Q9H2A3 272 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 NFS1Q9Y697 457 aa15.14■□□□□ 0.01
NPHP4-207ENST00000470763 SHANK3Q9BYB0 1731 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 MGRN1O60291 552 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 SCG2P13521 617 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 MAGOHP61326 146 aaKnown RBP15.13■□□□□ 0.01
NPHP4-207ENST00000470763 ARL6IP4Q66PJ3 421 aaKnown RBP15.13■□□□□ 0.01
NPHP4-207ENST00000470763 CCT6BQ92526 530 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 TATDN2Q93075 761 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 MAGOHBQ96A72 148 aaKnown RBP15.13■□□□□ 0.01
NPHP4-207ENST00000470763 GOLPH3Q9H4A6 298 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 SLC39A2Q9NP94 309 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 KBTBD4Q9NVX7 518 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.13■□□□□ 0.01
NPHP4-207ENST00000470763 PJA2O43164 708 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 KLRC1P26715 233 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 ECHS1P30084 290 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 PNMA8AQ86V59 439 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-207ENST00000470763 MAGEC3Q8TD91 643 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 NSMCE1Q8WV22 266 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-207ENST00000470763 L3MBTL1Q9Y468 752 aa15.13■□□□□ 0.01
NPHP4-207ENST00000470763 NHSQ6T4R5 1651 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 MYH7BA7E2Y1 1941 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 SRRM3A6NNA2 597 aaPredicted RBP15.12■□□□□ 0.01
NPHP4-207ENST00000470763 CLTAP09496 248 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 PEX19P40855 299 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 TRAPPC10P48553 1259 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 ARID5AQ03989 594 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 ADGRA1Q86SQ6 560 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 C1orf131Q8NDD1 294 aaKnown RBP15.12■□□□□ 0.01
NPHP4-207ENST00000470763 RSRC1Q96IZ7 334 aaKnown RBP15.12■□□□□ 0.01
NPHP4-207ENST00000470763 SEMA6BQ9H3T3 888 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 FBXL5Q9UKA1 691 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 GNAT2P19087 354 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 PLCG1P19174 1290 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 BAP1Q92560 729 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
NPHP4-207ENST00000470763 LRP2BPQ9P2M1 347 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 GCKP35557 465 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 CTSWP56202 376 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 TNNC1P63316 161 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 EVX2Q03828 476 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 IFFO1Q0D2I5 559 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 PUM3Q15397 648 aaKnown RBP15.12■□□□□ 0.01
NPHP4-207ENST00000470763 AP1M1Q9BXS5 423 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
NPHP4-207ENST00000470763 RNF14Q9UBS8 474 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms