RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 MCMBPQ9BTE3 642 aa5.68□□□□□ -1.5
TTC3-213ENST00000469939 NSUN3Q9H649 340 aaKnown RBP5.68□□□□□ -1.5
TTC3-213ENST00000469939 CRTAC1Q9NQ79 661 aa5.68□□□□□ -1.5
TTC3-213ENST00000469939 CHST12Q9NRB3 414 aa5.68□□□□□ -1.5
TTC3-213ENST00000469939 EMC9Q9Y3B6 208 aa5.68□□□□□ -1.5
TTC3-213ENST00000469939 TTBK1Q5TCY1 1321 aaPredicted RBP5.68□□□□□ -1.5
TTC3-213ENST00000469939 BLACEA4D250 179 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 NOP56O00567 594 aaKnown RBP5.67□□□□□ -1.5
TTC3-213ENST00000469939 OPA1O60313 960 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 BRINP1O60477 761 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 DLX3O60479 287 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 MYL1P05976 194 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 GABREP78334 506 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 MESP2Q0VG99 397 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 SYCP2LQ5T4T6 812 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 RCSD1Q6JBY9 416 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 SPATS2Q86XZ4 545 aaKnown RBP5.67□□□□□ -1.5
TTC3-213ENST00000469939 PASD1Q8IV76 773 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 CHMP4CQ96CF2 233 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 EVI5LQ96CN4 794 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 FAM84AQ96KN4 292 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 JMJD8Q96S16 334 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 PUS7LQ9H0K6 701 aaKnown RBP5.67□□□□□ -1.5
TTC3-213ENST00000469939 EPB41L4BQ9H329 900 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 AASDHPPTQ9NRN7 309 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 TRHDEQ9UKU6 1024 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 BACE2Q9Y5Z0 518 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 COMMD10Q9Y6G5 202 aa5.67□□□□□ -1.5
TTC3-213ENST00000469939 E2F8A0AVK6 867 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 C2orf71A6NGG8 1288 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 NEMP1O14524 444 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 GABRDO14764 452 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 PRPF3O43395 683 aaKnown RBP5.66□□□□□ -1.5
TTC3-213ENST00000469939 EFCAB14O75071 495 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 KCNH1O95259 989 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 TBC1D8O95759 1140 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 JMJD7P0C870 316 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 PNLIPP16233 465 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 BPIP17213 487 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 PDE6BP35913 854 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 ID4P47928 161 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 SEPHS1P49903 392 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 HDAC1Q13547 482 aaPredicted RBP5.66□□□□□ -1.5
TTC3-213ENST00000469939 HLTFQ14527 1009 aaKnown RBP eCLIP5.66□□□□□ -1.5
TTC3-213ENST00000469939 KIR3DS1Q14943 382 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 MLC1Q15049 377 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 NTRK3Q16288 839 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 FAM102BQ5T8I3 360 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 CDCA2Q69YH5 1023 aaPredicted RBP5.66□□□□□ -1.5
TTC3-213ENST00000469939 ZBTB46Q86UZ6 589 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 TRIM59Q8IWR1 403 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 TCEAL8Q8IYN2 117 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 FBXO15Q8NCQ5 510 aaPredicted RBP5.66□□□□□ -1.5
TTC3-213ENST00000469939 COG1Q8WTW3 980 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 BTN2A2Q8WVV5 523 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 CAMKK2Q96RR4 588 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 MPHOSPH6Q99547 160 aaKnown RBP5.66□□□□□ -1.5
TTC3-213ENST00000469939 DCP1AQ9NPI6 582 aaPredicted RBP5.66□□□□□ -1.5
TTC3-213ENST00000469939 NOB1Q9ULX3 412 aaKnown RBP5.66□□□□□ -1.5
TTC3-213ENST00000469939 TNKSO95271 1327 aa5.66□□□□□ -1.5
TTC3-213ENST00000469939 TCRBV16S1A1N1A0A5B0 115 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 LDHAP00338 332 aaKnown RBP5.65□□□□□ -1.5
TTC3-213ENST00000469939 PRKCAP17252 672 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 IGFALSP35858 605 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 TMPRSS15P98073 1019 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 OS9Q13438 667 aaPredicted RBP5.65□□□□□ -1.5
TTC3-213ENST00000469939 SF1Q15637 639 aaKnown RBP5.65□□□□□ -1.5
TTC3-213ENST00000469939 CFAP100Q494V2 611 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 ADGRF1Q5T601 910 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 NXNQ6DKJ4 435 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 PPP4R4Q6NUP7 873 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 SPOCD1Q6ZMY3 1216 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 SAMD3Q8N6K7 520 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 CNTD1Q8N815 330 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 NUP43Q8NFH3 380 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 USP7Q93009 1102 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 TTC1Q99614 292 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 IMPACTQ9P2X3 320 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 ACSL6Q9UKU0 697 aa5.65□□□□□ -1.5
TTC3-213ENST00000469939 A0A1W2PQ27 194 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 A0A1W2PQ64 194 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 A0A1W2PQC6 194 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 A0A1W2PQD8 194 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 OR14I1A6ND48 311 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 ABLIM3O94929 683 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 ARL4AP40617 200 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 CYP4F8P98187 520 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 LAPTM5Q13571 262 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 SKOR2Q2VWA4 1001 aaPredicted RBP5.64□□□□□ -1.51
TTC3-213ENST00000469939 SYDE2Q5VT97 1194 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 GTF2IRD2BQ6EKJ0 949 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 GTF2IRD2Q86UP8 949 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 PTPRN2Q92932 1015 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 MAGEB10Q96LZ2 347 aaPredicted RBP5.64□□□□□ -1.51
TTC3-213ENST00000469939 IFT22Q9H7X7 185 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 KCNK12Q9HB15 430 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 ZNF180Q9UJW8 692 aa5.64□□□□□ -1.51
TTC3-213ENST00000469939 SPEF1Q9Y4P9 236 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms