RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 UNC80Q8N2C7 3258 aa15.37■□□□□ 0.05
CPSF4-210ENST00000469897 KIF28PB7ZC32 967 aa15.36■□□□□ 0.05
CPSF4-210ENST00000469897 F2P00734 622 aa15.36■□□□□ 0.05
CPSF4-210ENST00000469897 UBA1P22314 1058 aaKnown RBP15.36■□□□□ 0.05
CPSF4-210ENST00000469897 PTK7Q13308 1070 aa15.36■□□□□ 0.05
CPSF4-210ENST00000469897 TMCO2Q7Z6W1 182 aaPredicted RBP15.36■□□□□ 0.05
CPSF4-210ENST00000469897 MICALL1Q8N3F8 863 aa15.36■□□□□ 0.05
CPSF4-210ENST00000469897 WNT8BQ93098 351 aa15.36■□□□□ 0.05
CPSF4-210ENST00000469897 SLC9A7Q96T83 725 aa15.36■□□□□ 0.05
CPSF4-210ENST00000469897 LY9Q9HBG7 655 aa15.36■□□□□ 0.05
CPSF4-210ENST00000469897 CDH23Q9H251 3354 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 PRC1O43663 620 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 NBNO60934 754 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 ARHGEF15O94989 841 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 MRPS9P82933 396 aaKnown RBP15.35■□□□□ 0.05
CPSF4-210ENST00000469897 COL9A3Q14050 684 aaPredicted RBP15.35■□□□□ 0.05
CPSF4-210ENST00000469897 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 ZNF618Q5T7W0 954 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 USP17L6PQ6QN14 398 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 NFXL1Q6ZNB6 911 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 ZNF654Q8IZM8 581 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
CPSF4-210ENST00000469897 CTCFLQ8NI51 663 aaPredicted RBP15.35■□□□□ 0.05
CPSF4-210ENST00000469897 ATXN2LQ8WWM7 1075 aaKnown RBP15.35■□□□□ 0.05
CPSF4-210ENST00000469897 RRP36Q96EU6 259 aaKnown RBP15.35■□□□□ 0.05
CPSF4-210ENST00000469897 ASB2Q96Q27 587 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 C16orf70Q9BSU1 422 aa15.35■□□□□ 0.05
CPSF4-210ENST00000469897 SPATA31C2B4DYI2 1134 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 TLL1O43897 1013 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 BAIAP3O94812 1187 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 HOXD8P13378 290 aaPredicted RBP15.34■□□□□ 0.05
CPSF4-210ENST00000469897 KCNJ6P48051 423 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 WDR5P61964 334 aaKnown RBP15.34■□□□□ 0.05
CPSF4-210ENST00000469897 RBL2Q08999 1139 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 TRIM71Q2Q1W2 868 aaKnown RBP15.34■□□□□ 0.05
CPSF4-210ENST00000469897 SRBD1Q8N5C6 995 aaKnown RBP15.34■□□□□ 0.05
CPSF4-210ENST00000469897 SMARCC2Q8TAQ2 1214 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 ARNTL2Q8WYA1 636 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 ZBED2Q9BTP6 218 aa15.34■□□□□ 0.05
CPSF4-210ENST00000469897 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
CPSF4-210ENST00000469897 EPOPA6NHQ4 379 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 CCDC69A6NI79 296 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 H3BRB1 525 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 SLC27A2O14975 620 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 PLEKHA8P1O95397 391 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 PARNO95453 639 aaKnown RBP15.33■□□□□ 0.04
CPSF4-210ENST00000469897 CXCL10P02778 98 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 RXRAP19793 462 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 ICAM3P32942 547 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 KIF5BP33176 963 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 MCM5P33992 734 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 MRPS5P82675 430 aaKnown RBP15.33■□□□□ 0.04
CPSF4-210ENST00000469897 TAP1Q03518 808 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 GNPTABQ3T906 1256 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 CNKSR3Q6P9H4 555 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 TRAF7Q6Q0C0 670 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 CYFIP1Q7L576 1253 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 SPRED2Q7Z698 418 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 RAB11FIP4Q86YS3 637 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 TMTC2Q8N394 836 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 CCDC82Q8N4S0 544 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 INPP4AQ96PE3 977 aaPredicted RBP15.33■□□□□ 0.04
CPSF4-210ENST00000469897 RNPEPQ9H4A4 650 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 TUT1Q9H6E5 874 aaKnown RBP15.33■□□□□ 0.04
CPSF4-210ENST00000469897 THEGQ9P2T0 379 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 TELO2Q9Y4R8 837 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 MTCH2Q9Y6C9 303 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 EYSQ5T1H1 3165 aa15.33■□□□□ 0.04
CPSF4-210ENST00000469897 C17orf102A2RUQ5 167 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 LCHNA4D1U4 455 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 NOP56O00567 594 aaKnown RBP15.32■□□□□ 0.04
CPSF4-210ENST00000469897 SH2B2O14492 632 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-210ENST00000469897 MEIS2O14770 477 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 DDAH1O94760 285 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 THPOP40225 353 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 DEFB103AP81534 67 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 SEMA3FQ13275 785 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 IKBKEQ14164 716 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 NEDD9Q14511 834 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 CUL5Q93034 780 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 ATP6V0A1Q93050 837 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 ESYT1Q9BSJ8 1104 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 MTA3Q9BTC8 594 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 SPZ1Q9BXG8 430 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 USP26Q9BXU7 913 aa15.32■□□□□ 0.04
CPSF4-210ENST00000469897 SEC63Q9UGP8 760 aaKnown RBP15.32■□□□□ 0.04
CPSF4-210ENST00000469897 ABHD14A-ACY1A0A1B0GW23 586 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 hCG_1642624A0A1W2PR95 340 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 RSPH10B2B2RC85 870 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 TREHO43280 583 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 FIBPO43427 364 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 STAM2O75886 525 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 LGALS2P05162 132 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 RSPH10BP0C881 870 aa15.31■□□□□ 0.04
CPSF4-210ENST00000469897 SMIM10L2AP0DMW4 78 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 228.1 ms