RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 B3GNT9Q6UX72 402 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 GPRASP2Q96D09 838 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 INPP4AQ96PE3 977 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-208ENST00000469529 MCOLN1Q9GZU1 580 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 TTC12Q9H892 705 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-208ENST00000469529 ZFYVE28Q9HCC9 887 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 TMEM63CQ9P1W3 806 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 EIF3JO75822 258 aaKnown RBP14.39□□□□□ -0.11
TRAF4-208ENST00000469529 ICAM3P32942 547 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 TXKP42681 527 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 SYKP43405 635 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 SPIRE1Q08AE8 756 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 ZNF467Q7Z7K2 595 aaPredicted RBP14.39□□□□□ -0.11
TRAF4-208ENST00000469529 PLA2G4DQ86XP0 818 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 CYP2W1Q8TAV3 490 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 SYMPKQ92797 1274 aaKnown RBP14.39□□□□□ -0.11
TRAF4-208ENST00000469529 EPSTI1Q96J88 318 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 CDHR1Q96JP9 859 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 MPHOSPH6Q99547 160 aaKnown RBP14.39□□□□□ -0.11
TRAF4-208ENST00000469529 PORCNQ9H237 461 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 MYH15Q9Y2K3 1946 aa14.39□□□□□ -0.11
TRAF4-208ENST00000469529 SMCHD1A6NHR9 2005 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 SOWAHBA6NEL2 793 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 PEX10O60683 326 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 KINO60870 393 aaKnown RBP14.38□□□□□ -0.11
TRAF4-208ENST00000469529 PSMD10O75832 226 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 MUTP22033 750 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 UBA7P41226 1012 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 ZNF445P59923 1031 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 PPP2R5CQ13362 524 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 TAF1CQ15572 869 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-208ENST00000469529 STXBP2Q15833 593 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 ZNF792Q3KQV3 632 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 HYIQ5T013 277 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 CAVIN1Q6NZI2 390 aaKnown RBP14.38□□□□□ -0.11
TRAF4-208ENST00000469529 USP49Q70CQ1 688 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 OTOP1Q7RTM1 612 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 NLRX1Q86UT6 975 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 IQUBQ8NA54 791 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 MMP19Q99542 508 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 CUEDC2Q9H467 287 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 KCNH7Q9NS40 1196 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 TBC1D22BQ9NU19 505 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 LRWD1Q9UFC0 647 aa14.38□□□□□ -0.11
TRAF4-208ENST00000469529 SLC15A5A6NIM6 579 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 DHX15O43143 795 aaKnown RBP14.37□□□□□ -0.11
TRAF4-208ENST00000469529 SLFN14P0C7P3 912 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 TGFB3P10600 412 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 EIF2AK2P19525 551 aaKnown RBP14.37□□□□□ -0.11
TRAF4-208ENST00000469529 TXLNAP40222 546 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 TECP42680 631 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 ALDH5A1P51649 535 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-208ENST00000469529 MDM2Q00987 491 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-208ENST00000469529 IRF5Q13568 498 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 E2F4Q16254 413 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 KRBA2Q6ZNG9 492 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 PLEKHH3Q7Z736 793 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 MSL3Q8N5Y2 521 aaKnown RBP14.37□□□□□ -0.11
TRAF4-208ENST00000469529 IL31RAQ8NI17 732 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 MMTAG2Q9BU76 263 aaKnown RBP14.37□□□□□ -0.11
TRAF4-208ENST00000469529 WDR11Q9BZH6 1224 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 NUP62CLQ9H1M0 184 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 R3HDMLQ9H3Y0 253 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 EFCC1Q9HA90 598 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 CCDC39Q9UFE4 941 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 VAV3Q9UKW4 847 aa14.37□□□□□ -0.11
TRAF4-208ENST00000469529 ASB14A6NK59 587 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 GPR25O00155 361 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
TRAF4-208ENST00000469529 MARCH6O60337 910 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 HOXC6P09630 235 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 ARP10275 920 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 CNTN2Q02246 1040 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 GRB14Q14449 540 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 GNPTABQ3T906 1256 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 LONRF3Q496Y0 759 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 SPECC1Q5M775 1068 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 KRT79Q5XKE5 535 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 KCNV1Q6PIU1 500 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 MAMDC4Q6UXC1 1216 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 GPR142Q7Z601 462 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 SH3RF1Q7Z6J0 888 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 ZNF296Q8WUU4 475 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-208ENST00000469529 CCDC34Q96HJ3 373 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 FGD4Q96M96 766 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 PURBQ96QR8 312 aaKnown RBP14.36□□□□□ -0.11
TRAF4-208ENST00000469529 MAGEF1Q9HAY2 307 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 AGO4Q9HCK5 861 aaKnown RBP14.36□□□□□ -0.11
TRAF4-208ENST00000469529 ASTN1O14525 1302 aa14.36□□□□□ -0.11
TRAF4-208ENST00000469529 CCDC85CA6NKD9 419 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 POLR2DO15514 142 aaKnown RBP14.35□□□□□ -0.11
TRAF4-208ENST00000469529 ACTN4O43707 911 aaKnown RBP14.35□□□□□ -0.11
TRAF4-208ENST00000469529 RGS20O76081 388 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 MYL1P05976 194 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 UBXN2AP68543 259 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 SEMA3FQ13275 785 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms