RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PABPC4Q13310 644 aaKnown RBP eCLIP13.62□□□□□ -0.232e-11■■■■□ 21.4
USP11-206ENST00000469080 SLC35G1Q2M3R5 365 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 PREPLQ4J6C6 727 aaPredicted RBP13.62□□□□□ -0.23
USP11-206ENST00000469080 C3orf20Q8ND61 904 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 GOLGA1Q92805 767 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 PRMT6Q96LA8 375 aaPredicted RBP13.62□□□□□ -0.23
USP11-206ENST00000469080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP11-206ENST00000469080 TMEM165Q9HC07 324 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 MTMR4Q9NYA4 1195 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 ATP6V0A2Q9Y487 856 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 SPDYE3A6NKU9 549 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 STXBP3O00186 592 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 PDHBP11177 359 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 ECE1P42892 770 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 CYP27A1Q02318 531 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 FUT2Q10981 343 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 USP4Q13107 963 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 GRM4Q14833 912 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 HERC4Q5GLZ8 1057 aaPredicted RBP13.61□□□□□ -0.23
USP11-206ENST00000469080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.61□□□□□ -0.23
USP11-206ENST00000469080 SEPT11Q9NVA2 429 aaKnown RBP13.61□□□□□ -0.23
USP11-206ENST00000469080 SLC37A4O43826 429 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 DGKZQ13574 1117 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 KRT31Q15323 416 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 CACNA2D4Q7Z3S7 1137 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 MASTLQ96GX5 879 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
USP11-206ENST00000469080 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 BARHL2Q9NY43 387 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
USP11-206ENST00000469080 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
USP11-206ENST00000469080 GPR75-ASB3A0A0A6YYF3 556 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 CCDC151A5D8V7 595 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 E9PMD0 336 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 KIF4AO95239 1232 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 RHBDL3P58872 404 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 ABCB5Q2M3G0 1257 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 RNF187Q5TA31 235 aaPredicted RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 SV2BQ7L1I2 683 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 NEDD1Q8NHV4 660 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 PPP2R2CQ9Y2T4 447 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 BMP15O95972 392 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 PMS1P54277 932 aaKnown RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 ATP2C1P98194 919 aaPredicted RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 PPP2R5BQ15173 497 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 WDR78Q5VTH9 848 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 VSTM4Q8IW00 320 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 CCDC155Q8N6L0 562 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 BCAS4Q8TDM0 211 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 SMCR8Q8TEV9 937 aaPredicted RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 A1CFQ9NQ94 594 aaKnown RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 CHCHD3Q9NX63 227 aaKnown RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 TUBE1Q9UJT0 475 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 TPD52L2O43399 206 aaKnown RBP13.6□□□□□ -0.23
USP11-206ENST00000469080 CDC25BP30305 580 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 STK4Q13043 487 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 SPATA1Q5VX52 437 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 FAM71BQ8TC56 605 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 FBXO28Q9NVF7 368 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 TRIM10Q9UDY6 481 aa13.6□□□□□ -0.23
USP11-206ENST00000469080 ZSCAN12O43309 604 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 KCNB1Q14721 858 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 DCAF17Q5H9S7 520 aaPredicted RBP13.59□□□□□ -0.23
USP11-206ENST00000469080 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 KRT25Q7Z3Z0 450 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 ANKRD23Q86SG2 305 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 CEP112Q8N8E3 955 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 GLIS3Q8NEA6 775 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 TBC1D5Q92609 795 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 RMI1Q9H9A7 625 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 MYO6Q9UM54 1294 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 RNF40O75150 1001 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
USP11-206ENST00000469080 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
USP11-206ENST00000469080 QRICH1Q2TAL8 776 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 TPH2Q8IWU9 490 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 SP8Q8IXZ3 490 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 PIGOQ8TEQ8 1089 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 ZNHIT6Q9NWK9 470 aaKnown RBP13.59□□□□□ -0.23
USP11-206ENST00000469080 TJP1Q07157 1748 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
USP11-206ENST00000469080 MAP2K7O14733 419 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 BRD3Q15059 726 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 PDCD2Q16342 344 aaPredicted RBP13.59□□□□□ -0.23
USP11-206ENST00000469080 TBC1D25Q3MII6 688 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 SBK1Q52WX2 424 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 THEMIS2Q5TEJ8 643 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 SARM1Q6SZW1 724 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 ZNF232Q9UNY5 417 aa13.59□□□□□ -0.23
USP11-206ENST00000469080 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
USP11-206ENST00000469080 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms