RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LRRC63Q05C16 580 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 HGSNATQ68CP4 663 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 TMC4Q7Z404 712 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 FUKQ8N0W3 1084 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 P3H4Q92791 437 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 HPS3Q969F9 1004 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
PTPRE-204ENST00000455661 TSG101Q99816 390 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 CEP72Q9P209 647 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 BCCIPQ9P287 314 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTPRE-204ENST00000455661 BAZ2AQ9UIF9 1905 aaKnown RBP15.09■□□□□ 0.01
PTPRE-204ENST00000455661 SLC8A1P32418 973 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 TRADDQ15628 312 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 ANKRD20A8PQ5CZ79 823 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 DZIP3Q86Y13 1208 aaKnown RBP15.09■□□□□ 0.01
PTPRE-204ENST00000455661 ZNF34Q8IZ26 560 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 SEC16BQ96JE7 1060 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 PRDM11Q9NQV5 511 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 PCDHGC5Q9Y5F6 944 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 RREB1Q92766 1687 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 CES2O00748 559 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 MYBP10242 640 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 PPP2R2AP63151 447 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 ATP2B2Q01814 1243 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 CHRNDQ07001 517 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 AGBL2Q5U5Z8 902 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 TMED8Q6PL24 325 aaPredicted RBP15.08■□□□□ 0
PTPRE-204ENST00000455661 HEATR3Q7Z4Q2 680 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 GUF1Q8N442 669 aaKnown RBP15.08■□□□□ 0
PTPRE-204ENST00000455661 SCLT1Q96NL6 688 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 SLC12A6Q9UHW9 1150 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 PVALEFA0A1B0GWK0 134 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 GCFC2P16383 781 aaKnown RBP15.08■□□□□ 0
PTPRE-204ENST00000455661 KLRC1P26715 233 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 HOXA7P31268 230 aaPredicted RBP15.08■□□□□ 0
PTPRE-204ENST00000455661 GKAP1Q5VSY0 366 aaPredicted RBP15.08■□□□□ 0
PTPRE-204ENST00000455661 UNC13DQ70J99 1090 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 PIGBQ92521 554 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 MIEF2Q96C03 454 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.08■□□□□ 0
PTPRE-204ENST00000455661 OSBPL7Q9BZF2 842 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 HAUS2Q9NVX0 235 aa15.08■□□□□ 0
PTPRE-204ENST00000455661 CCNT1O60563 726 aaKnown RBP15.07■□□□□ 0
PTPRE-204ENST00000455661 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
PTPRE-204ENST00000455661 TECP42680 631 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 ZNF844Q08AG5 666 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 RPS6KA1Q15418 735 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 KIAA0753Q2KHM9 967 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 LACTB2Q53H82 288 aaPredicted RBP15.07■□□□□ 0
PTPRE-204ENST00000455661 CPLX4Q7Z7G2 160 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 STAG2Q8N3U4 1231 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 UBLCP1Q8WVY7 318 aaPredicted RBP15.07■□□□□ 0
PTPRE-204ENST00000455661 TMEM59LQ9UK28 342 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 PACSIN2Q9UNF0 486 aaPredicted RBP15.07■□□□□ 0
PTPRE-204ENST00000455661 LEMD3Q9Y2U8 911 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 ATP6V0A2Q9Y487 856 aa15.07■□□□□ 0
PTPRE-204ENST00000455661 C5orf60A6NFR6 353 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 H0YGN5 161 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 DNM1LO00429 736 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 PDHBP11177 359 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 CYP19A1P11511 503 aaPredicted RBP15.06■□□□□ 0
PTPRE-204ENST00000455661 SCTRP47872 440 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
PTPRE-204ENST00000455661 ERVK-9P63128 1117 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 SLC18A3Q16572 532 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 LETM2Q2VYF4 491 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 KRT25Q7Z3Z0 450 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 OR2W6PQ8NHA6 318 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 TBC1D5Q92609 795 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 PBKQ96KB5 322 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
PTPRE-204ENST00000455661 SWAP70Q9UH65 585 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 NFS1Q9Y697 457 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 MYH1P12882 1939 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 KCNK3O14649 394 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 TMOD1P28289 359 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 KCNMA1Q12791 1236 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 QPCTQ16769 361 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 FAM83BQ5T0W9 1011 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 PNMA1Q8ND90 353 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 CARD10Q9BWT7 1032 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 RIC8AQ9NPQ8 531 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 BARHL2Q9NY43 387 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 TPX2Q9ULW0 747 aaKnown RBP15.06■□□□□ 0
PTPRE-204ENST00000455661 ZBTB1Q9Y2K1 713 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 ZNF142P52746 1687 aaPredicted RBP15.06■□□□□ 0
PTPRE-204ENST00000455661 NUP98P52948 1817 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 CASZ1Q86V15 1759 aa15.06■□□□□ 0
PTPRE-204ENST00000455661 PAEPP09466 180 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 GHRP10912 638 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 IBSPP21815 317 aaPredicted RBP15.05■□□□□ 0
PTPRE-204ENST00000455661 SCP2P22307 547 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 GYG1P46976 350 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 NONOQ15233 471 aaKnown RBP eCLIP15.05■□□□□ 0
PTPRE-204ENST00000455661 IFI16Q16666 785 aaKnown RBP15.05■□□□□ 0
PTPRE-204ENST00000455661 NBPF9Q3BBW0 867 aa15.05■□□□□ 0
PTPRE-204ENST00000455661 RCSD1Q6JBY9 416 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms