RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 TIMM13Q9Y5L4 95 aaPredicted RBP6.04□□□□□ -1.44
VPS29-202ENST00000447578 ZNF536O15090 1300 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 MATN3O15232 486 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 ZNF20P17024 532 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 RPL11P62913 178 aaKnown RBP6.03□□□□□ -1.44
VPS29-202ENST00000447578 SF1Q15637 639 aaKnown RBP6.03□□□□□ -1.44
VPS29-202ENST00000447578 FAM26FQ5R3K3 315 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 ZC3H18Q86VM9 953 aaKnown RBP6.03□□□□□ -1.44
VPS29-202ENST00000447578 FAM126BQ8IXS8 530 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 LGI4Q8N135 537 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 TTLL6Q8N841 843 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 TRMT2BQ96GJ1 504 aaKnown RBP6.03□□□□□ -1.44
VPS29-202ENST00000447578 SEC16BQ96JE7 1060 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 SAMD11Q96NU1 681 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 HIRIP3Q9BW71 556 aaPredicted RBP6.03□□□□□ -1.44
VPS29-202ENST00000447578 PCDH18Q9HCL0 1135 aa6.03□□□□□ -1.44
VPS29-202ENST00000447578 PPM1GO15355 546 aaPredicted RBP6.02□□□□□ -1.45
VPS29-202ENST00000447578 STK10O94804 968 aaKnown RBP6.02□□□□□ -1.45
VPS29-202ENST00000447578 ECI1P42126 302 aa6.02□□□□□ -1.45
VPS29-202ENST00000447578 SLC6A11P48066 632 aa6.02□□□□□ -1.45
VPS29-202ENST00000447578 ADAM9Q13443 819 aa6.02□□□□□ -1.45
VPS29-202ENST00000447578 ZSWIM3Q96MP5 696 aa6.02□□□□□ -1.45
VPS29-202ENST00000447578 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS29-202ENST00000447578 ST6GALNAC2Q9UJ37 374 aa6.02□□□□□ -1.45
VPS29-202ENST00000447578 ITGAVP06756 1048 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 NAT2P11245 290 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 ZNF143P52747 638 aaPredicted RBP6.01□□□□□ -1.45
VPS29-202ENST00000447578 NCAPHQ15003 741 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 PRSS53Q2L4Q9 553 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 MROH9Q5TGP6 573 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 C6orf15Q6UXA7 325 aaPredicted RBP6.01□□□□□ -1.45
VPS29-202ENST00000447578 FAM124AQ86V42 546 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 RIOX2Q8IUF8 465 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 ARRDC4Q8NCT1 418 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 RCBTB1Q8NDN9 531 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 DIO2Q92813 273 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 X6R8D5 127 aa6.01□□□□□ -1.45
VPS29-202ENST00000447578 B2RBV5 119 aa6□□□□□ -1.45
VPS29-202ENST00000447578 B4GALT3O60512 393 aa6□□□□□ -1.45
VPS29-202ENST00000447578 SNRPB2P08579 225 aaKnown RBP6□□□□□ -1.45
VPS29-202ENST00000447578 LCP1P13796 627 aa6□□□□□ -1.45
VPS29-202ENST00000447578 ATF4P18848 351 aaPredicted RBP6□□□□□ -1.45
VPS29-202ENST00000447578 NCLP19338 710 aaKnown RBP6□□□□□ -1.45
VPS29-202ENST00000447578 NKX3-2P78367 333 aa6□□□□□ -1.45
VPS29-202ENST00000447578 SV2CQ496J9 727 aa6□□□□□ -1.45
VPS29-202ENST00000447578 PRAMEF18Q5VWM3 479 aa6□□□□□ -1.45
VPS29-202ENST00000447578 IQCEQ6IPM2 695 aa6□□□□□ -1.45
VPS29-202ENST00000447578 BORAQ6PGQ7 559 aa6□□□□□ -1.45
VPS29-202ENST00000447578 MCF2L2Q86YR7 1114 aa6□□□□□ -1.45
VPS29-202ENST00000447578 Q8N1Y9 231 aa6□□□□□ -1.45
VPS29-202ENST00000447578 KREMEN2Q8NCW0 462 aa6□□□□□ -1.45
VPS29-202ENST00000447578 CHST13Q8NET6 341 aa6□□□□□ -1.45
VPS29-202ENST00000447578 TMEM169Q96HH4 297 aa6□□□□□ -1.45
VPS29-202ENST00000447578 LCORQ96JN0 433 aaPredicted RBP6□□□□□ -1.45
VPS29-202ENST00000447578 YIPF4Q9BSR8 244 aa6□□□□□ -1.45
VPS29-202ENST00000447578 MENTQ9BUN1 341 aa6□□□□□ -1.45
VPS29-202ENST00000447578 C1QTNF3Q9BXJ4 246 aa6□□□□□ -1.45
VPS29-202ENST00000447578 ZSWIM4Q9H7M6 989 aa6□□□□□ -1.45
VPS29-202ENST00000447578 TMA7Q9Y2S6 64 aaKnown RBP6□□□□□ -1.45
VPS29-202ENST00000447578 MRVI1Q9Y6F6 885 aa6□□□□□ -1.45
VPS29-202ENST00000447578 TLDC2A0PJX2 215 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 SMAD7O15105 426 aaKnown RBP5.99□□□□□ -1.45
VPS29-202ENST00000447578 ZNF28P17035 718 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 MLLT6P55198 1093 aaPredicted RBP5.99□□□□□ -1.45
VPS29-202ENST00000447578 E4F1Q66K89 784 aaPredicted RBP5.99□□□□□ -1.45
VPS29-202ENST00000447578 GLB1LQ6UWU2 654 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 ZNF227Q86WZ6 799 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 TTC9BQ8N6N2 239 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 SLC16A11Q8NCK7 471 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 SORCS2Q96PQ0 1159 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 LRP2BPQ9P2M1 347 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 WASF3Q9UPY6 502 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 PCDHA2Q9Y5H9 948 aa5.99□□□□□ -1.45
VPS29-202ENST00000447578 ANKRD62A6NC57 917 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 C1QTNF3-AMACRE9PGA6 284 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 MEFVO15553 781 aaPredicted RBP5.98□□□□□ -1.45
VPS29-202ENST00000447578 FSHBP01225 129 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 CYP1A1P04798 512 aaPredicted RBP5.98□□□□□ -1.45
VPS29-202ENST00000447578 HOXC12P31275 282 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 IL13P35225 146 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 KCNJ6P48051 423 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 DENND5AQ6IQ26 1287 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 SPRED1Q7Z699 444 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 CHAMP1Q96JM3 812 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 PPP4R1LQ9P1A2 415 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 STRIP2Q9ULQ0 834 aa5.98□□□□□ -1.45
VPS29-202ENST00000447578 COA3Q9Y2R0 106 aaPredicted RBP5.98□□□□□ -1.45
VPS29-202ENST00000447578 TCRBV5S2A0A599 114 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 HGSO14964 777 aaPredicted RBP5.97□□□□□ -1.45
VPS29-202ENST00000447578 LAMTOR5O43504 91 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 MYO1BO43795 1136 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 FGRP09769 529 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 GTF2A2P52657 109 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 HMGA2P52926 109 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 RBM10P98175 930 aaKnown RBP5.97□□□□□ -1.45
VPS29-202ENST00000447578 KCNAB2Q13303 367 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 ICAM4Q14773 271 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 LARP1BQ659C4 914 aaKnown RBP5.97□□□□□ -1.45
VPS29-202ENST00000447578 FAM178BQ8IXR5 827 aa5.97□□□□□ -1.45
VPS29-202ENST00000447578 PPIL6Q8IXY8 311 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms