RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 GNAT1P11488 350 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 CDK11BP21127 795 aaKnown RBP6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 MECP2P51608 486 aaKnown RBP6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 LACTBP83111 547 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 CYP4F8P98187 520 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 STRN3Q13033 797 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 KIR3DS1Q14943 382 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 ARHGAP44Q17R89 818 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 HABP4Q5JVS0 413 aaKnown RBP6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 OTOP3Q7RTS5 596 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 STRA8Q7Z7C7 330 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 CABP7Q86V35 215 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 PRPF38AQ8NAV1 312 aaKnown RBP6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 ATL2Q8NHH9 583 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 C19orf44Q9H6X5 657 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 RC3H2Q9HBD1 1191 aaKnown RBP6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 CRTAC1Q9NQ79 661 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 FBLN5Q9UBX5 448 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 B4GALT6Q9UBX8 382 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 GPR160Q9UJ42 338 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 CBLCQ9ULV8 474 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZNF561-AS1K7EIQ3 104 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 TRAF5O00463 557 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 KRIT1O00522 736 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 HYAL3O43820 417 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 BRINP1O60477 761 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 EFEMP2O95967 443 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 PNLIPP16233 465 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 PDE6AP16499 860 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 TACR1P25103 407 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 ARL4AP40617 200 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 CDKN1CP49918 316 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 DSG1Q02413 1049 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 SART3Q15020 963 aaKnown RBP6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 GPR19Q15760 415 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 CHRNA2Q15822 529 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 TIGD5Q53EQ6 642 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 CISD2Q8N5K1 135 aaKnown RBP6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 C2orf69Q8N8R5 385 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 NETO2Q8NC67 525 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 USP7Q93009 1102 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 TYW1Q9NV66 732 aaKnown RBP6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZKSCAN5Q9Y2L8 839 aa6.04□□□□□ -1.44
HMGB1P16-201ENST00000447155 ALG1L2C9J202 215 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZEB2O60315 1214 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 GAS7O60861 476 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 NTRK1P04629 796 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 GLI4P10075 376 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 BPIP17213 487 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 PMLP29590 882 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 AFMP43652 599 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 SLC6A11P48066 632 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 BICRALQ6AI39 1079 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 OSTM1Q86WC4 334 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 FLAD1Q8NFF5 587 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 SHISA4Q96DD7 197 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 TTC1Q99614 292 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 IFT22Q9H7X7 185 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 SLC6A20Q9NP91 592 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 HOMER2Q9NSB8 354 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 DDX56Q9NY93 547 aaKnown RBP6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 NUB1Q9Y5A7 615 aa6.03□□□□□ -1.44
HMGB1P16-201ENST00000447155 PTPDC1A2A3K4 754 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 ZNF891A8MT65 544 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 SRGAP3O43295 1099 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 MAFKO60675 156 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 AMY2AP04746 511 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 COL6A2P12110 1019 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 AMY2BP19961 511 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 JAM2P57087 298 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 SKOR2Q2VWA4 1001 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 EMC4Q5J8M3 183 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 CYP4F22Q6NT55 531 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 ARHGAP36Q6ZRI8 547 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 OTOP1Q7RTM1 612 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 DCP2Q8IU60 420 aaKnown RBP6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 ABI1Q8IZP0 508 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 NXPE1Q8N323 547 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 SMC1BQ8NDV3 1235 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 UHMK1Q8TAS1 419 aaKnown RBP6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 ABHD4Q8TB40 342 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 PIP4K2CQ8TBX8 421 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 SMURF1Q9HCE7 757 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 TNFRSF12AQ9NP84 129 aa6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 APOBEC2Q9Y235 224 aaKnown RBP6.02□□□□□ -1.45
HMGB1P16-201ENST00000447155 SCO2A0A1W2PP80 73 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 TCRBV5S4A2TA0A5A2 114 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 NKRFO15226 690 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 KRT15P19012 456 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 ERVFRD-1P60508 538 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 IL2P60568 153 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 OCRLQ01968 901 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 STAT4Q14765 748 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 ARTNQ5T4W7 220 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 RNF219Q5W0B1 726 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 STEAP3Q658P3 488 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 HHIPL2Q6UWX4 724 aa6.01□□□□□ -1.45
HMGB1P16-201ENST00000447155 EP400NLQ6ZTU2 488 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms