RNA–Protein interactions for RNA: ENST00000444973.5

NEK6-209, Transcript of NIMA related kinase 6, human

TSL 5

Gene NEK6, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-209	ENST00000444973	PGM5	Q15124	567 aa		32.84	■■■□□ 2.85
NEK6-209	ENST00000444973	TCTN1	Q2MV58	587 aa		32.84	■■■□□ 2.85
NEK6-209	ENST00000444973	WNT8B	Q93098	351 aa		32.84	■■■□□ 2.85
NEK6-209	ENST00000444973	UHRF1	Q96T88	793 aa	Predicted RBP	32.84	■■■□□ 2.85
NEK6-209	ENST00000444973	PTPRS	Q13332	1948 aa		32.84	■■■□□ 2.85
NEK6-209	ENST00000444973	CYP21A2	P08686	494 aa		32.83	■■■□□ 2.85
NEK6-209	ENST00000444973	DEFB103A	P81534	67 aa		32.83	■■■□□ 2.85
NEK6-209	ENST00000444973	MYSM1	Q5VVJ2	828 aa		32.83	■■■□□ 2.85
NEK6-209	ENST00000444973	SPATA33	Q96N06	139 aa		32.83	■■■□□ 2.85
NEK6-209	ENST00000444973	TAF6L	Q9Y6J9	622 aa		32.83	■■■□□ 2.85
NEK6-209	ENST00000444973	MYH7B	A7E2Y1	1941 aa		32.83	■■■□□ 2.85
NEK6-209	ENST00000444973	REV3L	O60673	3130 aa		32.82	■■■□□ 2.85
NEK6-209	ENST00000444973	PRRC2B	Q5JSZ5	2229 aa	Known RBP	32.82	■■■□□ 2.85
NEK6-209	ENST00000444973	LCHN	A4D1U4	455 aa		32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	IFIT3	O14879	490 aa	Known RBP	32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	GGPS1	O95749	300 aa		32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	HSDL1	Q3SXM5	330 aa		32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	CELF3	Q5SZQ8	465 aa	Known RBP	32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	CNKSR3	Q6P9H4	555 aa		32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	VSIG10L	Q86VR7	867 aa		32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	FCHSD1	Q86WN1	690 aa		32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	MAP3K20	Q9NYL2	800 aa	Known RBP	32.82	■■■□□ 2.84
NEK6-209	ENST00000444973	HOXD8	P13378	290 aa	Predicted RBP	32.81	■■■□□ 2.84
NEK6-209	ENST00000444973	POU3F3	P20264	500 aa	Predicted RBP	32.81	■■■□□ 2.84
NEK6-209	ENST00000444973	SP2	Q02086	613 aa		32.81	■■■□□ 2.84
NEK6-209	ENST00000444973	PTK7	Q13308	1070 aa		32.81	■■■□□ 2.84
NEK6-209	ENST00000444973	HIC1	Q14526	733 aa		32.81	■■■□□ 2.84
NEK6-209	ENST00000444973	RIOX1	Q9H6W3	641 aa		32.81	■■■□□ 2.84
NEK6-209	ENST00000444973		U3KPZ7	1027 aa	Predicted RBP	32.81	■■■□□ 2.84
NEK6-209	ENST00000444973	GCOM1	H8Y6P7	765 aa	Predicted RBP	32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	CYTH3	O43739	400 aa		32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	CXCL10	P02778	98 aa		32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	POLR2M	P0CAP2	368 aa		32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	UBA1	P22314	1058 aa	Known RBP	32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	TRIM71	Q2Q1W2	868 aa	Known RBP	32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	NECAB3	Q96P71	396 aa	Predicted RBP	32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	ZBED2	Q9BTP6	218 aa		32.8	■■■□□ 2.84
NEK6-209	ENST00000444973	PARN	O95453	639 aa	Known RBP	32.79	■■■□□ 2.84
NEK6-209	ENST00000444973	CHML	P26374	656 aa		32.79	■■■□□ 2.84
NEK6-209	ENST00000444973	CCND2	P30279	289 aa		32.79	■■■□□ 2.84
NEK6-209	ENST00000444973	ZNF618	Q5T7W0	954 aa		32.79	■■■□□ 2.84
NEK6-209	ENST00000444973	KCNV1	Q6PIU1	500 aa		32.79	■■■□□ 2.84
NEK6-209	ENST00000444973	TRAF7	Q6Q0C0	670 aa		32.79	■■■□□ 2.84
NEK6-209	ENST00000444973	ERICH2	A1L162	156 aa		32.78	■■■□□ 2.84
NEK6-209	ENST00000444973	PPFIA4	O75335	1185 aa		32.78	■■■□□ 2.84
NEK6-209	ENST00000444973	KCNQ1	P51787	676 aa		32.78	■■■□□ 2.84
NEK6-209	ENST00000444973	GRB10	Q13322	594 aa		32.78	■■■□□ 2.84
NEK6-209	ENST00000444973	RALYL	Q86SE5	291 aa	Known RBP	32.78	■■■□□ 2.84
NEK6-209	ENST00000444973	SAMD3	Q8N6K7	520 aa		32.78	■■■□□ 2.84
NEK6-209	ENST00000444973	RUFY2	Q8WXA3	655 aa		32.78	■■■□□ 2.84
NEK6-209	ENST00000444973	BAZ2B	Q9UIF8	2168 aa	Known RBP	32.77	■■■□□ 2.84
NEK6-209	ENST00000444973	MBTPS1	Q14703	1052 aa		32.77	■■■□□ 2.84
NEK6-209	ENST00000444973	WTAP	Q15007	396 aa		32.77	■■■□□ 2.84
NEK6-209	ENST00000444973	PIBF1	Q8WXW3	757 aa		32.77	■■■□□ 2.84
NEK6-209	ENST00000444973	PNMA6F	A0A0J9YX94	578 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973		E7EWF7	191 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	BMP1	P13497	986 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	TROAP	Q12815	778 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	C16orf70	Q9BSU1	422 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	BCAS3	Q9H6U6	928 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	MLXIP	Q9HAP2	919 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	TRANK1	O15050	2925 aa		32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	TCF20	Q9UGU0	1960 aa	Known RBP	32.76	■■■□□ 2.83
NEK6-209	ENST00000444973	COL4A4	P53420	1690 aa	Predicted RBP	32.75	■■■□□ 2.83
NEK6-209	ENST00000444973	ABHD14A-ACY1	A0A1B0GW23	586 aa		32.75	■■■□□ 2.83
NEK6-209	ENST00000444973	LPXN	O60711	386 aa		32.75	■■■□□ 2.83
NEK6-209	ENST00000444973	TRAF1	Q13077	416 aa		32.75	■■■□□ 2.83
NEK6-209	ENST00000444973	NCOA7	Q8NI08	942 aa		32.75	■■■□□ 2.83
NEK6-209	ENST00000444973	TGFB3	P10600	412 aa		32.74	■■■□□ 2.83
NEK6-209	ENST00000444973	SART3	Q15020	963 aa	Known RBP	32.74	■■■□□ 2.83
NEK6-209	ENST00000444973	AAK1	Q2M2I8	961 aa		32.74	■■■□□ 2.83
NEK6-209	ENST00000444973	FAM117B	Q6P1L5	589 aa		32.74	■■■□□ 2.83
NEK6-209	ENST00000444973	GDPD5	Q8WTR4	605 aa		32.74	■■■□□ 2.83
NEK6-209	ENST00000444973	XIRP2	A4UGR9	3374 aa		32.73	■■■□□ 2.83
NEK6-209	ENST00000444973	GJB5	O95377	273 aa		32.73	■■■□□ 2.83
NEK6-209	ENST00000444973	ANTXR2	P58335	489 aa		32.73	■■■□□ 2.83
NEK6-209	ENST00000444973	IKBKE	Q14164	716 aa		32.73	■■■□□ 2.83
NEK6-209	ENST00000444973	MTUS1	Q9ULD2	1270 aa		32.73	■■■□□ 2.83
NEK6-209	ENST00000444973	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.73	■■■□□ 2.83
NEK6-209	ENST00000444973	THPO	P40225	353 aa		32.72	■■■□□ 2.83
NEK6-209	ENST00000444973	CATIP	Q7Z7H3	387 aa		32.72	■■■□□ 2.83
NEK6-209	ENST00000444973	SERINC5	Q86VE9	423 aa		32.72	■■■□□ 2.83
NEK6-209	ENST00000444973	LGR5	O75473	907 aa		32.71	■■■□□ 2.83
NEK6-209	ENST00000444973	MRPS9	P82933	396 aa	Known RBP	32.71	■■■□□ 2.83
NEK6-209	ENST00000444973	RAD9A	Q99638	391 aa		32.71	■■■□□ 2.83
NEK6-209	ENST00000444973		H3BRB1	525 aa		32.7	■■■□□ 2.83
NEK6-209	ENST00000444973	SGSM2	O43147	1006 aa		32.7	■■■□□ 2.83
NEK6-209	ENST00000444973	LGALS2	P05162	132 aa		32.7	■■■□□ 2.83
NEK6-209	ENST00000444973	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	32.7	■■■□□ 2.83
NEK6-209	ENST00000444973	ATP6V0A1	Q93050	837 aa		32.7	■■■□□ 2.83
NEK6-209	ENST00000444973	TUT1	Q9H6E5	874 aa	Known RBP	32.7	■■■□□ 2.83
NEK6-209	ENST00000444973	RTEL1	Q9NZ71	1219 aa		32.7	■■■□□ 2.83
NEK6-209	ENST00000444973	C17orf102	A2RUQ5	167 aa		32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	EFCAB14	O75071	495 aa		32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	SMIM10L2A	P0DMW4	78 aa		32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	SMIM10L2B	P0DMW5	78 aa		32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	COL9A1	P20849	921 aa		32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	MB21D2	Q8IYB1	491 aa	Predicted RBP	32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	IGDCC4	Q8TDY8	1250 aa		32.69	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms