RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 AP3B2Q13367 1082 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 BECN1Q14457 450 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 INPP5AQ14642 412 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ARHGAP29Q52LW3 1261 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 NUTM2GQ5VZR2 741 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 HEATR6Q6AI08 1181 aaKnown RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 VN1R5Q7Z5H4 357 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ZNF227Q86WZ6 799 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GSTCDQ8NEC7 633 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 IPCEF1Q8WWN9 437 aaPredicted RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 OSBP2Q969R2 916 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 WNK4Q96J92 1243 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ZNF396Q96N95 335 aaPredicted RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PLCB1Q9NQ66 1216 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PPP1R9AQ9ULJ8 1098 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 DUOX2Q9NRD8 1548 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ROCK2O75116 1388 aaKnown RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 APAF1O14727 1248 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 KIAA0754O94854 1291 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 AGR2O95994 175 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TP53P04637 393 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MSL3P1P0C860 447 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 BMP2P12643 396 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SELPP16109 830 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 XBP1P17861 261 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 IL4RP24394 825 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MSNP26038 577 aaKnown RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CYP2C19P33261 490 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 BPIFB3P59826 476 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MLLT1Q03111 559 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CCDC173Q0VFZ6 552 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GTF2H3Q13889 308 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GBX1Q14549 363 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TMEM201Q5SNT2 666 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 AGAP9Q5VTM2 703 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CTR9Q6PD62 1173 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SASS6Q6UVJ0 657 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 RASGRP2Q7LDG7 609 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 RAB44Q7Z6P3 723 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MICALL1Q8N3F8 863 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GPBAR1Q8TDU6 330 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GIMAP1Q8WWP7 306 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FUBP3Q96I24 572 aaKnown RBP eCLIP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MAGEB10Q96LZ2 347 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 AGAP3Q96P47 875 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 HAUS7Q99871 368 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FAM167BQ9BTA0 163 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CRTAC1Q9NQ79 661 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 HOXC10Q9NYD6 342 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ZBTB21Q9ULJ3 1066 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TPCN1Q9ULQ1 816 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 BCORL1Q5H9F3 1711 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TTC24A2A3L6 582 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ERC2O15083 957 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PRKD3O94806 890 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ARIH2O95376 493 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ITGBL1O95965 494 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GLULP15104 373 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 POLR2BP30876 1174 aaKnown RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GPLD1P80108 840 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 LAMC2Q13753 1193 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 HS1BP3Q53T59 392 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CDCA2Q69YH5 1023 aaPredicted RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ISM2Q6H9L7 571 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MZT2AQ6P582 158 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 LRFN4Q6PJG9 635 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 LVRNQ6Q4G3 990 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SLC13A1Q9BZW2 595 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ZC3H12CQ9C0D7 883 aaKnown RBP6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MARK1Q9P0L2 795 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 DYRK1BQ9Y463 629 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PCDHGC4Q9Y5F7 938 aa6.67□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FRMPD2Q68DX3 1309 aaPredicted RBP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ERBINQ96RT1 1412 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 IQGAP3Q86VI3 1631 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CFAP65Q6ZU64 1925 aaKnown RBP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FAM177BA6PVY3 158 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 B4E1Z4 1266 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TULP2O00295 520 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FOXN3O00409 490 aaPredicted RBP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 INMTO95050 263 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ESRRAP11474 423 aaPredicted RBP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SKILP12757 684 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ATF7P17544 494 aaPredicted RBP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 STIP1P31948 543 aaKnown RBP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 RENBPP51606 427 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PMS1P54277 932 aaKnown RBP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MZT2BQ6NZ67 158 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TAX1BP1Q86VP1 789 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FCHSD1Q86WN1 690 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CPA6Q8N4T0 437 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TEX9Q8N6V9 391 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 NKAIN3Q8N8D7 197 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TEKT1Q969V4 418 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ELMO3Q96BJ8 720 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SCLYQ96I15 445 aa6.66□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TNIP3Q96KP6 325 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms