RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 LRRC41Q15345 812 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 ECM1Q16610 540 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 KIF4BQ2VIQ3 1234 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 Q4G0T1 1027 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 CCDC40Q4G0X9 1142 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 PRR16Q569H4 304 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 MIIPQ5JXC2 388 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 TEX35Q5T0J7 233 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 FOXR2Q6PJQ5 311 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 POTEBQ6S5H4 581 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 NIM1KQ8IY84 436 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 SLC35F6Q8N357 371 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 GOLGA1Q92805 767 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 DNAJC19Q96DA6 116 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 UIMC1Q96RL1 719 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 PSMD1Q99460 953 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 CHP1Q99653 195 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 OGFRQ9NZT2 677 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 MYO1AQ9UBC5 1043 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 PRR12Q9ULL5 1215 aa11.59□□□□□ -0.55
CPNE1-218ENST00000439806 LOXHD1Q8IVV2 1947 aa11.58□□□□□ -0.55
CPNE1-218ENST00000439806 A0A0U1RQJ8 604 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 A0A1W2PQJ5 194 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 MED24O75448 989 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 VIL1P09327 827 aaKnown RBP11.58□□□□□ -0.56
CPNE1-218ENST00000439806 STAT3P40763 770 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 KLK7P49862 253 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 JAG1P78504 1218 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 CBX1P83916 185 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 EHHADHQ08426 723 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
CPNE1-218ENST00000439806 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 FIGNQ5HY92 759 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 SPICE1Q8N0Z3 855 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 CEP112Q8N8E3 955 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 CHURC1Q8WUH1 139 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 ATRIPQ8WXE1 791 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 FAM20AQ96MK3 541 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 NAPGQ99747 312 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-218ENST00000439806 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 ZHX3Q9H4I2 956 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 HAUS4Q9H6D7 363 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 SH2D4AQ9H788 454 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
CPNE1-218ENST00000439806 A0A1W2PRG0 241 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 TRAF5O00463 557 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 H2AFXP16104 143 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CYP11B2P19099 503 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CIITAP33076 1130 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 ARHGAP25P42331 645 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 ECE1P42892 770 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 SF3B2Q13435 895 aaKnown RBP11.57□□□□□ -0.56
CPNE1-218ENST00000439806 MEA1Q16626 185 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 HERC4Q5GLZ8 1057 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-218ENST00000439806 FAM83BQ5T0W9 1011 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CCDC174Q6PII3 467 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 FAM160B2Q86V87 743 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 TEX2Q8IWB9 1127 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CCDC170Q8IYT3 715 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 ETNPPLQ8TBG4 499 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CRYGNQ8WXF5 182 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 JAKMIP2Q96AA8 810 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 EEF2KMTQ96G04 330 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CEP63Q96MT8 703 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 IRX2Q9BZI1 471 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-218ENST00000439806 TTYH3Q9C0H2 523 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 VPS33BQ9H267 617 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 NDST4Q9H3R1 872 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 AGPAT5Q9NUQ2 364 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 TBC1D7Q9P0N9 293 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 DDX41Q9UJV9 622 aaKnown RBP11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CDC23Q9UJX2 597 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 TMX2Q9Y320 296 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 COL4A3BPQ9Y5P4 624 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 PITPNM2Q9BZ72 1349 aa11.57□□□□□ -0.56
CPNE1-218ENST00000439806 CNTNAP1P78357 1384 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 GNA14O95837 355 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 CYP3A4P08684 503 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 DPEP1P16444 411 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 TAL1P17542 331 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-218ENST00000439806 HOXA13P31271 388 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-218ENST00000439806 FKBP3Q00688 224 aaKnown RBP11.56□□□□□ -0.56
CPNE1-218ENST00000439806 POTEGQ6S5H5 508 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 POTEEQ6S8J3 1075 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 SRGAP1Q7Z6B7 1085 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 NELFCDQ8IXH7 590 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 GPR161Q8N6U8 529 aaKnown RBP11.56□□□□□ -0.56
CPNE1-218ENST00000439806 EHBP1Q8NDI1 1231 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 AGBL3Q8NEM8 1001 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
CPNE1-218ENST00000439806 ACER1Q8TDN7 264 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms