RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 GJB4Q9NTQ9 266 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 VPS54Q9P1Q0 977 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 PGAP2Q9UHJ9 254 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 HACL1Q9UJ83 578 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 PNMA2Q9UL42 364 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZBTB21Q9ULJ3 1066 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 MTMR7Q9Y216 660 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 HRH3Q9Y5N1 445 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 CLIC4Q9Y696 253 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 USP3Q9Y6I4 520 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 ATAD5Q96QE3 1844 aa4.53□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZNF541Q9H0D2 1346 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 hCG_1642624A0A1W2PR95 340 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 FSD2A1L4K1 749 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 SMCO2A6NFE2 343 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMEM88BA6NKF7 163 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 SOBPA7XYQ1 873 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 UBE2Q2LH0YL09 131 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 STXBP3O00186 592 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 LAD1O00515 517 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 CYTH3O43739 400 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 MAN1A2O60476 641 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PRMT3O60678 531 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 KINO60870 393 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 GDF11O95390 407 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 CAVIN2O95810 425 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 BMP3P12645 472 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 DEKP35659 375 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 SCNN1AP37088 669 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 MRE11P49959 708 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TOB1P50616 345 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 ADCY7P51828 1080 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PRELPP51888 382 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 SMTNP53814 917 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 USP14P54578 494 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PTPAQ15257 358 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TLR1Q15399 786 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 MAP3K11Q16584 847 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 WWC2Q6AWC2 1192 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZNF787Q6DD87 383 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 LRSAM1Q6UWE0 723 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 BTNL9Q6UXG8 535 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 SIAH1Q8IUQ4 282 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 ADGRF4Q8IZF3 695 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 REXO1Q8N1G1 1221 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 FSIP1Q8NA03 581 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PIBF1Q8WXW3 757 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 ANP32BQ92688 251 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TNFRSF25Q93038 417 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 DCPSQ96C86 337 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 MTMR8Q96EF0 704 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 CCDC34Q96HJ3 373 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PGBD1Q96JS3 809 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PRIMPOLQ96LW4 560 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TIGD1Q96MW7 591 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TEPSINQ96N21 525 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 NAP1L4Q99733 375 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PYM1Q9BRP8 204 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZNF341Q9BYN7 854 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 UBA5Q9GZZ9 404 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 NUP62CLQ9H1M0 184 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TNMDQ9H2S6 317 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TSPY26PQ9H489 355 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 CLSTN2Q9H4D0 955 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 JMJD4Q9H9V9 463 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 RIC8AQ9NPQ8 531 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 ADARB2Q9NS39 739 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 FAM13BQ9NYF5 915 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 RNF181Q9P0P0 153 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMEM63CQ9P1W3 806 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 HOOK1Q9UJC3 728 aaKnown RBP4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 PCDHA7Q9UN72 937 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMX2Q9Y320 296 aa4.52□□□□□ -1.69
HMGB1P37-201ENST00000439613 FRMPD2Q68DX3 1309 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 FAM237AA0A1B0GTK4 181 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SHTN1A0MZ66 631 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SYCE3A1L190 88 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 A6NJY4 79 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 PHF20L1A8MW92 1017 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMEM232C9JQI7 657 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 M0R2N6 131 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 NDUFB10O96000 172 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 FOSP01100 380 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 CCDC192P0DO97 292 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SNRPBP14678 240 aaKnown RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 LIG1P18858 919 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 MARCKSP29966 332 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 STAT2P52630 851 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 IKQ13123 557 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 ELOAQ14241 798 aaKnown RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 RRP1BQ14684 758 aaKnown RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 NONOQ15233 471 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZRSR1Q15695 479 aaKnown RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 NPY5RQ15761 445 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 GPR162Q16538 588 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLC35G1Q2M3R5 365 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 TTC38Q5R3I4 469 aa4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 AXDND1Q5T1B0 1012 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P37-201ENST00000439613 SYDE2Q5VT97 1194 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms