RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PXYLP1Q8TE99 480 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 RIT2Q99578 217 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 ABHD16BQ9H3Z7 469 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-202ENST00000439369 CNPY2Q9Y2B0 182 aa14.36□□□□□ -0.11
SCLT1-202ENST00000439369 RBM47A0AV96 593 aaKnown RBP14.35□□□□□ -0.11
SCLT1-202ENST00000439369 GOLGA6L22H0YM25 854 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 RGS20O76081 388 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 CYP2B6P20813 491 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 MFSD14CQ5VZR4 134 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 SCFD2Q8WU76 684 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 SENP7Q9BQF6 1050 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.113e-8■□□□□ 9.8
SCLT1-202ENST00000439369 KCNH7Q9NS40 1196 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 TBC1D22BQ9NU19 505 aa14.35□□□□□ -0.11
SCLT1-202ENST00000439369 SRPRBQ9Y5M8 271 aaKnown RBP14.35□□□□□ -0.11
SCLT1-202ENST00000439369 IPO5O00410 1097 aaKnown RBP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 MSH4O15457 936 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 MARCH6O60337 910 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 CUTAO60888 179 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 SNAI1O95863 264 aaPredicted RBP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 TMEM266Q2M3C6 531 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 DTHD1Q6ZMT9 781 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 KRI1Q8N9T8 703 aaKnown RBP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 CYP2W1Q8TAV3 490 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 HAS1Q92839 578 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 AK8Q96MA6 479 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 ZNF577Q9BSK1 485 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 RAB34Q9BZG1 259 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 KATNBL1Q9H079 304 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 TMEM60Q9H2L4 133 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 AGO4Q9HCK5 861 aaKnown RBP14.34□□□□□ -0.11
SCLT1-202ENST00000439369 GABRQQ9UN88 632 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 NFASCO94856 1347 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 ZSWIM8A7E2V4 1837 aa14.34□□□□□ -0.11
SCLT1-202ENST00000439369 SLC26A4O43511 780 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 ARP10275 920 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 HSPA8P11142 646 aaKnown RBP14.33□□□□□ -0.12
SCLT1-202ENST00000439369 PTMSP20962 102 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 LONP1P36776 959 aaKnown RBP14.33□□□□□ -0.12
SCLT1-202ENST00000439369 CAP1Q01518 475 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 ACVR2BQ13705 512 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 PDIA5Q14554 519 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 IQSEC1Q6DN90 963 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 OTOP1Q7RTM1 612 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 SLAIN1Q8ND83 568 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 FLRT1Q9NZU1 646 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 FBXO2Q9UK22 296 aaPredicted RBP14.33□□□□□ -0.12
SCLT1-202ENST00000439369 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 STK24Q9Y6E0 443 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 MRVI1Q9Y6F6 885 aa14.33□□□□□ -0.12
SCLT1-202ENST00000439369 NKRFO15226 690 aaKnown RBP eCLIP14.32□□□□□ -0.12
SCLT1-202ENST00000439369 PSMD10O75832 226 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 HMGCRP04035 888 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 ME1P48163 572 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 PPP2R5CQ13362 524 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 NEDD9Q14511 834 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 CCL14Q16627 93 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 LRCH2Q5VUJ6 765 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 TAPT1Q6NXT6 567 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 CCDC62Q6P9F0 684 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 IGSF22Q8N9C0 903 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 RAET1EQ8TD07 263 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 TCEAL9Q9UHQ7 104 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 TSKSQ9UJT2 592 aa14.32□□□□□ -0.12
SCLT1-202ENST00000439369 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 DOCK3Q8IZD9 2030 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 A0A1W2PQD8 194 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 DDX11L8A8MPP1 907 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 FOXN1O15353 648 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 DHX15O43143 795 aaKnown RBP14.31□□□□□ -0.12
SCLT1-202ENST00000439369 ADCY3O60266 1144 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 GAS7O60861 476 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 ECM2O94769 699 aaPredicted RBP14.31□□□□□ -0.12
SCLT1-202ENST00000439369 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
SCLT1-202ENST00000439369 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
SCLT1-202ENST00000439369 KCNA2P16389 499 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 TXKP42681 527 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 KRT76Q01546 638 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 ADALQ6DHV7 355 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 B3GNT9Q6UX72 402 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 SEPT14Q6ZU15 432 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 FBXO16Q8IX29 292 aaPredicted RBP14.31□□□□□ -0.12
SCLT1-202ENST00000439369 RDM1Q8NG50 284 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 TRIB2Q92519 343 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 CHAMP1Q96JM3 812 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 TEKT3Q9BXF9 490 aa14.31□□□□□ -0.12
SCLT1-202ENST00000439369 TTC12Q9H892 705 aaPredicted RBP14.31□□□□□ -0.12
SCLT1-202ENST00000439369 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms