RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 WDR11Q9BZH6 1224 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 TM6SF1Q9BZW5 370 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 KATNBL1Q9H079 304 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 AP5M1Q9H0R1 490 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 NCOA5Q9HCD5 579 aaKnown RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 RTEL1Q9NZ71 1219 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 NRBP1Q9UHY1 535 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 KIAA1217Q5T5P2 1943 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 SMCO2A6NFE2 343 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 DDX11L8A8MPP1 907 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 DNM1LO00429 736 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 DUSP11O75319 330 aaKnown RBP6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 ASGR1P07306 291 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 NR3C2P08235 984 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 SYN1P17600 705 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 HSD17B4P51659 736 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 AK2P54819 239 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 NAPAP54920 295 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 CHMP4BP1P59074 171 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 AKAP17AQ02040 695 aaKnown RBP6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 PGM5Q15124 567 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 UBE2SQ16763 222 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 LY6KQ17RY6 165 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 SLC39A5Q6ZMH5 540 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 UBE2Q1Q7Z7E8 422 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 RNF180Q86T96 592 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 C7orf61Q8IZ16 206 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 RDH13Q8NBN7 331 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 DNERQ8NFT8 737 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 MORC4Q8TE76 937 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 PGBD1Q96JS3 809 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 REPIN1Q9BWE0 567 aaKnown RBP6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 SLC26A6Q9BXS9 759 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 FAM117AQ9C073 453 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 PSTPIP2Q9H939 334 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 SPC25Q9HBM1 224 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 PXMP2Q9NR77 195 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 TMEM260Q9NX78 707 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 TPCN1Q9ULQ1 816 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 SYNRGQ9UMZ2 1314 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 ALPK3Q96L96 1907 aa6.64□□□□□ -1.35
HMGB3P24-201ENST00000433260 CCDC196A0A1B0GTZ2 297 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 BHMG1C9JSJ3 638 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 C3orf80F5H4A9 247 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 H0YGN5 161 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 MEIS2O14770 477 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 PRPF3O43395 683 aaKnown RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 EIF5BO60841 1220 aaKnown RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 ADAMTS4O75173 837 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 EIF3JO75822 258 aaKnown RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 MYL3P08590 195 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 COL6A1P12109 1028 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 CAPN2P17655 700 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 ACLYP53396 1101 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 GJA9P57773 515 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 ANAPC15P60006 121 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 SSRP1Q08945 709 aaKnown RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 FUT2Q10981 343 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 KIAA0100Q14667 2235 aaKnown RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 PPP2R5BQ15173 497 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 NTRK3Q16288 839 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 LRRC26Q2I0M4 334 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 POTEGQ6S5H5 508 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 TLK2Q86UE8 772 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 FBXL16Q8N461 479 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 NECAB1Q8N987 351 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 OR6J1Q8NGC5 347 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 PPP1R13LQ8WUF5 828 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 CNTNAP5Q8WYK1 1306 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 ZNF274Q96GC6 653 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 IWS1Q96ST2 819 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 PDCD2LQ9BRP1 358 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 AGXT2Q9BYV1 514 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 C22orf23Q9BZE7 217 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 SLKQ9H2G2 1235 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 DOCK5Q9H7D0 1870 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 STARD7Q9NQZ5 370 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 MAP3K20Q9NYL2 800 aaKnown RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 ZMYND8Q9ULU4 1186 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 PCDHA6Q9UN73 950 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 ATP11BQ9Y2G3 1177 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 PCDHA8Q9Y5H6 950 aa6.63□□□□□ -1.35
HMGB3P24-201ENST00000433260 A0A1W2PQ45 241 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 A0A1W2PQY0 241 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 RBM47A0AV96 593 aaKnown RBP6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 STXBP3O00186 592 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 CPLX1O14810 134 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 ADAMTS3O15072 1205 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 CTAGE5O15320 804 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 RNF40O75150 1001 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 ARIH2O95376 493 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 SCG2P13521 617 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 EDNRBP24530 442 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 CCND2P30279 289 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 ADCY7P51828 1080 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 EVCP57679 992 aa6.62□□□□□ -1.35
HMGB3P24-201ENST00000433260 RTP1P59025 263 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms