RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 C1QTNF3Q9BXJ4 246 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 PMF1-BGLAPU3KQ54 211 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 C7orf72A4D263 438 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 CYBBP04839 570 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 MSL3P1P0C860 447 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 LTBRP36941 435 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 GJA9P57773 515 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 CYP4F3Q08477 520 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 KIR3DS1Q14943 382 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 SLC35F1Q5T1Q4 408 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 BICRALQ6AI39 1079 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 SPATC1Q76KD6 591 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 SAPCD2Q86UD0 394 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 PPIL6Q8IXY8 311 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 C1orf159Q96HA4 380 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 LOXL4Q96JB6 756 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 SAMD11Q96NU1 681 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 IPO9Q96P70 1041 aaKnown RBP4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 SLITRK6Q9H5Y7 841 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 KANSL2Q9H9L4 492 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 ARHGEF4Q9NR80 690 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 FAN1Q9Y2M0 1017 aa4.29□□□□□ -1.72
HMGB1P9-201ENST00000429856 KDM2BQ8NHM5 1336 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 A0A1B0GTL3 188 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 SH3D21A4FU49 640 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 FAM221BA6H8Z2 402 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 CYR61O00622 381 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 PRODHO43272 600 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 NOBOXO60393 691 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 DLX3O60479 287 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 DBHP09172 617 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 PABPC1P11940 636 aaKnown RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 C6P13671 934 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 GRIA2P42262 883 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 RPL11P62913 178 aaKnown RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 ZNF200P98182 395 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 SF1Q15637 639 aaKnown RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 PRSS53Q2L4Q9 553 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 PLEKHN1Q494U1 663 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 VWA3BQ502W6 1294 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 PAQR3Q6TCH7 311 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 RSPO2Q6UXX9 243 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 NSMFQ6X4W1 530 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 USP51Q70EK9 711 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 ANKRD13AQ8IZ07 590 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 TTC9BQ8N6N2 239 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 ZBTB38Q8NAP3 1195 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 NETO2Q8NC67 525 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 KREMEN2Q8NCW0 462 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 CHST13Q8NET6 341 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 MRFAP1L1Q96HT8 127 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 RBM15Q96T37 977 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 MTA3Q9BTC8 594 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 GPR27Q9NS67 375 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 GULP1Q9UBP9 304 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 PFDN2Q9UHV9 154 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 NUDT5Q9UKK9 219 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 TIMM13Q9Y5L4 95 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 NPFFR2Q9Y5X5 522 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 DUSP10Q9Y6W6 482 aa4.28□□□□□ -1.72
HMGB1P9-201ENST00000429856 ADCY3O60266 1144 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 ZNF20P17024 532 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 TACR1P25103 407 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 SUMO1P63165 101 aaKnown RBP4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 INF2Q27J81 1249 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 MBLAC2Q68D91 279 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 CCDC103Q8IW40 242 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 SCUBE1Q8IWY4 988 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 USP33Q8TEY7 942 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 ZNF526Q8TF50 670 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 DCAF4Q8WV16 495 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 C8orf49Q96NF6 230 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 CDC6Q99741 560 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 ZFYVE21Q9BQ24 234 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 CHMP4AQ9BY43 222 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 RWDD3Q9Y3V2 267 aa4.27□□□□□ -1.73
HMGB1P9-201ENST00000429856 TRBV23-1A0A0A0MS06 115 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 CCDC163A0A0D9SF12 145 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 H7BY64 318 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 DIAPH1O60610 1272 aaKnown RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 GLI4P10075 376 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 NCLP19338 710 aaKnown RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 TACR2P21452 398 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 SLC9A5Q14940 896 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 WWC2Q6AWC2 1192 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 USP53Q70EK8 1073 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 DCP2Q8IU60 420 aaKnown RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 RIOX2Q8IUF8 465 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 CARFQ8N187 725 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 Q8N1Y9 231 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 JMYQ8N9B5 988 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 ZSWIM2Q8NEG5 633 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 THAP3Q8WTV1 239 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 OSBP2Q969R2 916 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 PEX11GQ96HA9 241 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 RNPC3Q96LT9 517 aaKnown RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 DNAJC7Q99615 494 aa4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 SCAND2PQ9GZW5 306 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P9-201ENST00000429856 RNF38Q9H0F5 515 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms