RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 NOP56O00567 594 aaKnown RBP13.89□□□□□ -0.19
TTC3-208ENST00000428693 MCM5P33992 734 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 KCNJ6P48051 423 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 SP4Q02446 784 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
TTC3-208ENST00000428693 KCNV1Q6PIU1 500 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 VSIG10LQ86VR7 867 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 CMTR1Q8N1G2 835 aaKnown RBP13.89□□□□□ -0.19
TTC3-208ENST00000428693 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 IGDCC4Q8TDY8 1250 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 GPKOWQ92917 476 aaPredicted RBP eCLIP13.89□□□□□ -0.19
TTC3-208ENST00000428693 LRRC2Q9BYS8 371 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 LY9Q9HBG7 655 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 PCDHA11Q9Y5I1 949 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 RGS20O76081 388 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 DDAH1O94760 285 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 GNPTABQ3T906 1256 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 MYSM1Q5VVJ2 828 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 SAMD3Q8N6K7 520 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 CAGE1Q8TC20 777 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 GTF2IRD1Q9UHL9 959 aa13.88□□□□□ -0.19
TTC3-208ENST00000428693 hCG_1642624A0A1W2PR95 340 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 KIF28PB7ZC32 967 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 SLC27A2O14975 620 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 PLEKHA8P1O95397 391 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 CA3P07451 260 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 SELPP16109 830 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 UBA1P22314 1058 aaKnown RBP13.87□□□□□ -0.19
TTC3-208ENST00000428693 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
TTC3-208ENST00000428693 SP2Q02086 613 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 CREB3L3Q68CJ9 461 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 USP17L6PQ6QN14 398 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 LRRC8DQ7L1W4 858 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 AFAP1L1Q8TED9 768 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
TTC3-208ENST00000428693 VWCEQ96DN2 955 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
TTC3-208ENST00000428693 PRDM6Q9NQX0 595 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 SLC12A7Q9Y666 1083 aa13.87□□□□□ -0.19
TTC3-208ENST00000428693 VCANP13611 3396 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 SH2B2O14492 632 aaPredicted RBP13.86□□□□□ -0.19
TTC3-208ENST00000428693 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 CKBP12277 381 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 GNAQP50148 359 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 GHRHRQ02643 423 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 ADGRE1Q14246 886 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 SKIV2LQ15477 1246 aaKnown RBP13.86□□□□□ -0.19
TTC3-208ENST00000428693 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
TTC3-208ENST00000428693 SYNE3Q6ZMZ3 975 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 CYFIP1Q7L576 1253 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 SESTD1Q86VW0 696 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 TMTC2Q8N394 836 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
TTC3-208ENST00000428693 TMEM87BQ96K49 555 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 SLC9A7Q96T83 725 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 LZTS2Q9BRK4 669 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 SPZ1Q9BXG8 430 aa13.86□□□□□ -0.19
TTC3-208ENST00000428693 NAP1L2Q9ULW6 460 aaPredicted RBP13.86□□□□□ -0.19
TTC3-208ENST00000428693 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 RFXAPO00287 272 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 TLL1O43897 1013 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 F2P00734 622 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 CALM1P0DP23 149 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 CALM2P0DP24 149 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 CALM3P0DP25 149 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 TGFB3P10600 412 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 THPOP40225 353 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 PTK7Q13308 1070 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 RNF20Q5VTR2 975 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 FAM117BQ6P1L5 589 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 TMCO2Q7Z6W1 182 aaPredicted RBP13.85□□□□□ -0.19
TTC3-208ENST00000428693 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 HERC6Q8IVU3 1022 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 SRBD1Q8N5C6 995 aaKnown RBP13.85□□□□□ -0.19
TTC3-208ENST00000428693 IL27Q8NEV9 243 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 ARNTL2Q8WYA1 636 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 ATP6V0A1Q93050 837 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 MAP3K14Q99558 947 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 CHD9Q3L8U1 2897 aa13.85□□□□□ -0.19
TTC3-208ENST00000428693 C17orf102A2RUQ5 167 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 H3BRB1 525 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 LGALS2P05162 132 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 MRPS9P82933 396 aaKnown RBP13.84□□□□□ -0.19
TTC3-208ENST00000428693 NEDD9Q14511 834 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 ZNF618Q5T7W0 954 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 NLRX1Q86UT6 975 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 PHOSPHO2Q8TCD6 241 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 TUT1Q9H6E5 874 aaKnown RBP13.84□□□□□ -0.19
TTC3-208ENST00000428693 PSTPIP2Q9H939 334 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 PKD2L1Q9P0L9 805 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 TANC1Q9C0D5 1861 aa13.84□□□□□ -0.19
TTC3-208ENST00000428693 HAS3O00219 553 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms