RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KCNK18Q7Z418 384 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 KCTD17Q8N5Z5 321 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 MXRA8Q9BRK3 442 aa17.04■□□□□ 0.32
ACTB-204ENST00000425660 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
ACTB-204ENST00000425660 ZNF18P17022 549 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 ITGB5P18084 799 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 STAT3P40763 770 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 UBXN2AP68543 259 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 SLC30A10Q6XR72 485 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 LBX2Q6XYB7 198 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 MOB2Q70IA6 237 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 ARMC9Q7Z3E5 817 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 ERMNQ8TAM6 284 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 LRRC27Q9C0I9 530 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 MCM6Q14566 821 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 B3GNT9Q6UX72 402 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 CATSPER3Q86XQ3 398 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 SMYD4Q8IYR2 804 aaPredicted RBP17.03■□□□□ 0.32
ACTB-204ENST00000425660 MB21D1Q8N884 522 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 GIMAP8Q8ND71 665 aaPredicted RBP17.03■□□□□ 0.32
ACTB-204ENST00000425660 FANCLQ9NW38 375 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 NFE2L3Q9Y4A8 694 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 A0A0G2JMZ2 1700 aa17.03■□□□□ 0.32
ACTB-204ENST00000425660 COL11A1P12107 1806 aaPredicted RBP17.02■□□□□ 0.32
ACTB-204ENST00000425660 PVALEFA0A1B0GWK0 134 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 MYMKA6NI61 221 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 MED24O75448 989 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 SPATA31C1P0DKV0 1188 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 MRPS9P82933 396 aaKnown RBP17.02■□□□□ 0.31
ACTB-204ENST00000425660 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.31
ACTB-204ENST00000425660 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 LRCH2Q5VUJ6 765 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 IL31RAQ8NI17 732 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 TAAR1Q96RJ0 339 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 UIMC1Q96RL1 719 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 RIT2Q99578 217 aa17.02■□□□□ 0.31
ACTB-204ENST00000425660 POLR3CQ9BUI4 534 aaPredicted RBP17.02■□□□□ 0.31
ACTB-204ENST00000425660 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 ATP1A3P13637 1013 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 PGM5Q15124 567 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 SPATA1Q5VX52 437 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 XRRA1Q6P2D8 792 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 ADSSL1Q8N142 457 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 RMDN3Q96TC7 470 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 PDCD2LQ9BRP1 358 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 WDR11Q9BZH6 1224 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 ACAD9Q9H845 621 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 PXMP2Q9NR77 195 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 RWDD2AQ9UIY3 292 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 KIAA1024Q9UPX6 916 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 SYNRGQ9UMZ2 1314 aa17.01■□□□□ 0.31
ACTB-204ENST00000425660 IPO5O00410 1097 aaKnown RBP17■□□□□ 0.31
ACTB-204ENST00000425660 PTMAP06454 111 aaKnown RBP17■□□□□ 0.31
ACTB-204ENST00000425660 POTEIP0CG38 1075 aa17■□□□□ 0.31
ACTB-204ENST00000425660 POTEJP0CG39 1038 aa17■□□□□ 0.31
ACTB-204ENST00000425660 ARP10275 920 aa17■□□□□ 0.31
ACTB-204ENST00000425660 ASIC1P78348 528 aa17■□□□□ 0.31
ACTB-204ENST00000425660 MOGSQ13724 837 aa17■□□□□ 0.31
ACTB-204ENST00000425660 BAATQ14032 418 aaPredicted RBP17■□□□□ 0.31
ACTB-204ENST00000425660 NSMFQ6X4W1 530 aa17■□□□□ 0.31
ACTB-204ENST00000425660 UNC13DQ70J99 1090 aa17■□□□□ 0.31
ACTB-204ENST00000425660 TRMT44Q8IYL2 757 aaKnown RBP17■□□□□ 0.31
ACTB-204ENST00000425660 CCDC47Q96A33 483 aaKnown RBP17■□□□□ 0.31
ACTB-204ENST00000425660 OPTNQ96CV9 577 aa17■□□□□ 0.31
ACTB-204ENST00000425660 HSD17B14Q9BPX1 270 aa17■□□□□ 0.31
ACTB-204ENST00000425660 ZNF577Q9BSK1 485 aa17■□□□□ 0.31
ACTB-204ENST00000425660 RRAGCQ9HB90 399 aa17■□□□□ 0.31
ACTB-204ENST00000425660 JADE2Q9NQC1 790 aa17■□□□□ 0.31
ACTB-204ENST00000425660 KCNH7Q9NS40 1196 aa17■□□□□ 0.31
ACTB-204ENST00000425660 AGTPBP1Q9UPW5 1226 aa17■□□□□ 0.31
ACTB-204ENST00000425660 GDAQ9Y2T3 454 aa17■□□□□ 0.31
ACTB-204ENST00000425660 GOLGA6L6A8MZA4 724 aa17■□□□□ 0.31
ACTB-204ENST00000425660 EML1O00423 815 aa17■□□□□ 0.31
ACTB-204ENST00000425660 GAS7O60861 476 aa17■□□□□ 0.31
ACTB-204ENST00000425660 MUTP22033 750 aa17■□□□□ 0.31
ACTB-204ENST00000425660 PRCPP42785 496 aa17■□□□□ 0.31
ACTB-204ENST00000425660 FANCCQ00597 558 aa17■□□□□ 0.31
ACTB-204ENST00000425660 EHHADHQ08426 723 aa17■□□□□ 0.31
ACTB-204ENST00000425660 ZSCAN30Q86W11 494 aa17■□□□□ 0.31
ACTB-204ENST00000425660 CHST13Q8NET6 341 aa17■□□□□ 0.31
ACTB-204ENST00000425660 DDX12PQ92771 950 aa17■□□□□ 0.31
ACTB-204ENST00000425660 CYP39A1Q9NYL5 469 aa17■□□□□ 0.31
ACTB-204ENST00000425660 ESPNB1AK53 854 aa16.99■□□□□ 0.31
ACTB-204ENST00000425660 PPP1R2P41236 205 aa16.99■□□□□ 0.31
ACTB-204ENST00000425660 PAK1Q13153 545 aa16.99■□□□□ 0.31
ACTB-204ENST00000425660 KLHL10Q6JEL2 608 aa16.99■□□□□ 0.31
ACTB-204ENST00000425660 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
ACTB-204ENST00000425660 XPO4Q9C0E2 1151 aaKnown RBP16.99■□□□□ 0.31
ACTB-204ENST00000425660 TUFT1Q9NNX1 390 aa16.99■□□□□ 0.31
ACTB-204ENST00000425660 A1CFQ9NQ94 594 aaKnown RBP16.99■□□□□ 0.31
ACTB-204ENST00000425660 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
ACTB-204ENST00000425660 POTEFA5A3E0 1075 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 E9PMD0 336 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 TPM3P06753 285 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms